RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 MAP1LC3BQ9GZQ8 125 aa10.21□□□□□ -0.77
LINC00643-207ENST00000637212 OR51M1Q9H341 326 aa10.21□□□□□ -0.77
LINC00643-207ENST00000637212 TMEM231Q9H6L2 316 aa10.21□□□□□ -0.77
LINC00643-207ENST00000637212 SLC25A22Q9H936 323 aa10.21□□□□□ -0.77
LINC00643-207ENST00000637212 IGHV3OR16-8A0A075B7F1 116 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 ZNF207O43670 478 aaKnown RBP10.2□□□□□ -0.78
LINC00643-207ENST00000637212 CD5P06127 495 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 RPL7P18124 248 aaKnown RBP10.2□□□□□ -0.78
LINC00643-207ENST00000637212 PSMB3P49720 205 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 PPT1P50897 306 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 MORN5Q5VZ52 161 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 HIST2H2BDQ6DRA6 164 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 C16orf54Q6UWD8 224 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 IL34Q6ZMJ4 242 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 SSX7Q7RTT5 188 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 BPIFA4PQ86YQ2 179 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 OR8I2Q8N0Y5 310 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 C3orf56Q8N813 242 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 OR9G4Q8NGQ1 327 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 SPATA3Q8NHX4 192 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 SUN5Q8TC36 379 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 DUX3Q96PT4 197 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 SCRT1Q9BWW7 348 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 HRH4Q9H3N8 390 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 TMEM167BQ9NRX6 74 aa10.2□□□□□ -0.78
LINC00643-207ENST00000637212 TMEM213A2RRL7 107 aa10.19□□□□□ -0.78
LINC00643-207ENST00000637212 C2orf70A6NJV1 201 aa10.19□□□□□ -0.78
LINC00643-207ENST00000637212 CHEK1O14757 476 aa10.19□□□□□ -0.78
LINC00643-207ENST00000637212 APOHP02749 345 aaPredicted RBP10.19□□□□□ -0.78
LINC00643-207ENST00000637212 HIST1H1EP10412 219 aaKnown RBP10.19□□□□□ -0.78
LINC00643-207ENST00000637212 CBLN1P23435 193 aa10.19□□□□□ -0.78
LINC00643-207ENST00000637212 GCHFRP30047 84 aa10.19□□□□□ -0.78
LINC00643-207ENST00000637212 PAXXQ9BUH6 204 aa10.19□□□□□ -0.78
LINC00643-207ENST00000637212 ELOVL1Q9BW60 279 aa10.19□□□□□ -0.78
LINC00643-207ENST00000637212 RHPN1-AS1Q9BWJ2 59 aa10.19□□□□□ -0.78
LINC00643-207ENST00000637212 MED9Q9NWA0 146 aa10.19□□□□□ -0.78
LINC00643-207ENST00000637212 SIGLEC8Q9NYZ4 499 aa10.19□□□□□ -0.78
LINC00643-207ENST00000637212 M0QZ24 198 aa10.18□□□□□ -0.78
LINC00643-207ENST00000637212 OVOL1O14753 267 aa10.18□□□□□ -0.78
LINC00643-207ENST00000637212 HMGB3O15347 200 aaKnown RBP10.18□□□□□ -0.78
LINC00643-207ENST00000637212 OR7C2O60412 319 aa10.18□□□□□ -0.78
LINC00643-207ENST00000637212 ARL14EPLP0DKL9 152 aa10.18□□□□□ -0.78
LINC00643-207ENST00000637212 FOLR2P14207 255 aa10.18□□□□□ -0.78
LINC00643-207ENST00000637212 TAGLN2P37802 199 aaKnown RBP10.18□□□□□ -0.78
LINC00643-207ENST00000637212 MEOX2P50222 304 aa10.18□□□□□ -0.78
LINC00643-207ENST00000637212 FGF8P55075 233 aaPredicted RBP10.18□□□□□ -0.78
LINC00643-207ENST00000637212 CCL20P78556 96 aa10.18□□□□□ -0.78
LINC00643-207ENST00000637212 GUK1Q16774 197 aa10.18□□□□□ -0.78
LINC00643-207ENST00000637212 LEMD1Q68G75 181 aa10.18□□□□□ -0.78
LINC00643-207ENST00000637212 ZNF503Q96F45 646 aa10.18□□□□□ -0.78
LINC00643-207ENST00000637212 LINC00862A6NCI5 91 aa10.17□□□□□ -0.78
LINC00643-207ENST00000637212 HELTA6NFD8 242 aa10.17□□□□□ -0.78
LINC00643-207ENST00000637212 MRPS12O15235 138 aaKnown RBP10.17□□□□□ -0.78
LINC00643-207ENST00000637212 CSN3P07498 182 aa10.17□□□□□ -0.78
LINC00643-207ENST00000637212 NBEAP1P0C6P0 100 aa10.17□□□□□ -0.78
LINC00643-207ENST00000637212 GP9P14770 177 aa10.17□□□□□ -0.78
LINC00643-207ENST00000637212 GALR1P47211 349 aa10.17□□□□□ -0.78
LINC00643-207ENST00000637212 PCNPQ8WW12 178 aaKnown RBP10.17□□□□□ -0.78
LINC00643-207ENST00000637212 GLMPQ8WWB7 406 aa10.17□□□□□ -0.78
LINC00643-207ENST00000637212 FXYD5Q96DB9 178 aa10.17□□□□□ -0.78
LINC00643-207ENST00000637212 EIF3GO75821 320 aaKnown RBP eCLIP10.16□□□□□ -0.78
LINC00643-207ENST00000637212 IFNA1P01562 189 aa10.16□□□□□ -0.78
LINC00643-207ENST00000637212 PF4P02776 101 aa10.16□□□□□ -0.78
LINC00643-207ENST00000637212 IGLC2P0DOY2 106 aa10.16□□□□□ -0.78
LINC00643-207ENST00000637212 TMPRSS5Q9H3S3 457 aa10.16□□□□□ -0.78
LINC00643-207ENST00000637212 SMAD5-AS1Q9Y6J3 95 aa10.16□□□□□ -0.78
LINC00643-207ENST00000637212 ARL2-SNX15V9GYD0 113 aa10.16□□□□□ -0.78
LINC00643-207ENST00000637212 IGHV3OR16-13A0A075B7E8 117 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 A0A087X0K7 114 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 IGHV3-49A0A0A0MS15 119 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 IGHV3-74A0A0B4J1X5 117 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 IGHV3-66A0A0C4DH42 116 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 A0A1B0GV50 99 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 ZNF785A8K8V0 405 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 PYYP10082 97 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 UBE2L3P68036 154 aaKnown RBP10.15□□□□□ -0.78
LINC00643-207ENST00000637212 NDUFA5Q16718 116 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 FAM90A2PQ658T7 463 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 SIGLEC15Q6ZMC9 328 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 LYPD1Q8N2G4 141 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 LINC00482Q8N8I6 264 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 TXNDC17Q9BRA2 123 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 NKX6-2Q9C056 277 aaPredicted RBP10.15□□□□□ -0.78
LINC00643-207ENST00000637212 MANBALQ9NQG1 85 aa10.15□□□□□ -0.78
LINC00643-207ENST00000637212 TRBV19A0A075B6N1 114 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 A0A1W2PRE2 83 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 RAB19A4D1S5 217 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 H3BQ15 152 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 ZNF253O75346 499 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 OR10J4P0C629 311 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 ATF4P18848 351 aaPredicted RBP10.14□□□□□ -0.79
LINC00643-207ENST00000637212 PDE6HQ13956 83 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 SAMD13Q5VXD3 122 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 ADAMTSL5Q6ZMM2 481 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 IQCF2Q8IXL9 164 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 WFDC9Q8NEX5 89 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 SMDT1Q9H4I9 107 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 ZNF586Q9NXT0 402 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 GNG13Q9P2W3 67 aa10.14□□□□□ -0.79
LINC00643-207ENST00000637212 RBFOX3A6NFN3 312 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms