RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 SRP19P09132 144 aaKnown RBP5.17□□□□□ -1.58
GABRB3-218ENST00000635994 SAA4P35542 130 aa5.17□□□□□ -1.58
GABRB3-218ENST00000635994 ATP5G3P48201 142 aa5.17□□□□□ -1.58
GABRB3-218ENST00000635994 PMVKQ15126 192 aa5.17□□□□□ -1.58
GABRB3-218ENST00000635994 TRAV13-1A0A0B4J241 112 aa5.17□□□□□ -1.58
GABRB3-218ENST00000635994 RAMP1O60894 148 aa5.17□□□□□ -1.58
GABRB3-218ENST00000635994 CD24P25063 80 aa5.17□□□□□ -1.58
GABRB3-218ENST00000635994 GFI1BQ5VTD9 330 aa5.17□□□□□ -1.58
GABRB3-218ENST00000635994 C1QL2Q7Z5L3 287 aa5.17□□□□□ -1.58
GABRB3-218ENST00000635994 GPHA2Q96T91 129 aa5.17□□□□□ -1.58
GABRB3-218ENST00000635994 RBM38Q9H0Z9 239 aaKnown RBP5.17□□□□□ -1.58
GABRB3-218ENST00000635994 LINC00527Q9UJ94 153 aa5.17□□□□□ -1.58
GABRB3-218ENST00000635994 TSSC4Q9Y5U2 329 aaPredicted RBP5.17□□□□□ -1.58
GABRB3-218ENST00000635994 NPIPB5A8MRT5 1133 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 GAS1P54826 345 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 ATOH7Q8N100 152 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 ZNF114Q8NC26 417 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 ST6GALNAC6Q969X2 333 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 DOPEY1Q5JWR5 2465 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 SCN1AP35498 2009 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 A0A0U1RRA0 63 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 H3BQ85 93 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 OVOL3O00110 214 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 FGF16O43320 207 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 GNG5P63218 68 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 EFNB3Q15768 340 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 MDS2Q8NDY4 140 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 NCOR1P1Q9H4R4 102 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 TCRAP04437 139 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 ESDP10768 282 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 SSBP2P81877 361 aaPredicted RBP5.16□□□□□ -1.58
GABRB3-218ENST00000635994 GAGE2BQ13066 116 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 C1QL4Q86Z23 238 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 PAQR4Q8N4S7 273 aaPredicted RBP5.16□□□□□ -1.58
GABRB3-218ENST00000635994 C18orf12Q96KH6 178 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 UBL5Q9BZL1 73 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 PMS2P5A8MQ11 134 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 C2orf82Q6UX34 121 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 LINC00114Q6XXX2 140 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 RPRMLQ8N4K4 120 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 CITED1Q99966 193 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 CSTL1Q9H114 145 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 DEPPQ9NTK1 212 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 CCDC88CQ9P219 2028 aa5.16□□□□□ -1.58
GABRB3-218ENST00000635994 NDUFA4O00483 81 aa5.15□□□□□ -1.58
GABRB3-218ENST00000635994 AZU1P20160 251 aa5.15□□□□□ -1.58
GABRB3-218ENST00000635994 RPL23P62829 140 aaKnown RBP5.15□□□□□ -1.58
GABRB3-218ENST00000635994 GAGE13Q4V321 117 aa5.15□□□□□ -1.58
GABRB3-218ENST00000635994 IGFL3Q6UXB1 125 aa5.15□□□□□ -1.58
GABRB3-218ENST00000635994 H0YJW9 148 aa5.15□□□□□ -1.58
GABRB3-218ENST00000635994 YPEL3P61236 119 aaPredicted RBP5.15□□□□□ -1.58
GABRB3-218ENST00000635994 CTAG1AP78358 180 aa5.15□□□□□ -1.58
GABRB3-218ENST00000635994 RHOHQ15669 191 aa5.15□□□□□ -1.58
GABRB3-218ENST00000635994 KLF17Q5JT82 389 aaPredicted RBP5.15□□□□□ -1.58
GABRB3-218ENST00000635994 CARHSP1Q9Y2V2 147 aaKnown RBP5.15□□□□□ -1.58
GABRB3-218ENST00000635994 TRBV6-6A0A0A6YYG2 114 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 IGHV2-70DA0A0C4DH43 119 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 H3BUT2 72 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 NDUFB1O75438 58 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 CLPSP04118 112 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 PYYP10082 97 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 ZNF250P15622 560 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 MPZP25189 248 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 CFPP27918 469 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 ID3Q02535 119 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 TMEM170AQ8WVE7 144 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 C4orf51C9J302 202 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 RIPPLY3P57055 190 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 RPL15P61313 204 aaKnown RBP5.15□□□□□ -1.59
GABRB3-218ENST00000635994 IFITM3Q01628 133 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 ANAPC13Q9BS18 74 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 C1orf43Q9BWL3 253 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 REG4Q9BYZ8 158 aa5.15□□□□□ -1.59
GABRB3-218ENST00000635994 IGHV1OR15-1A0A075B7D0 117 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 IGKV2-40A0A087WW87 121 aaPredicted RBP5.14□□□□□ -1.59
GABRB3-218ENST00000635994 I3L3M4 83 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 IGKV2D-40P01614 121 aaPredicted RBP5.14□□□□□ -1.59
GABRB3-218ENST00000635994 KLRD1Q13241 179 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 ZNF329Q86UD4 541 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 LCTP09848 1927 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 FNDC1Q4ZHG4 1894 aaPredicted RBP5.14□□□□□ -1.59
GABRB3-218ENST00000635994 CACNA1HO95180 2353 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 ACACAQ13085 2346 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 IGHV3-73A0A0B4J1V6 119 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 GAGE12JA6NER3 117 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 FOXF2Q12947 444 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 GAGE1Q13065 139 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 GAGE4Q13068 117 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 GAGE5Q13069 117 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 RNF152Q8N8N0 203 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 KLF2Q9Y5W3 355 aaPredicted RBP5.14□□□□□ -1.59
GABRB3-218ENST00000635994 SCN3AQ9NY46 2000 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 PPIFP30405 207 aaKnown RBP5.14□□□□□ -1.59
GABRB3-218ENST00000635994 UTF1Q5T230 341 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 ZCCHC24Q8N2G6 241 aaKnown RBP5.14□□□□□ -1.59
GABRB3-218ENST00000635994 Q8NFD4 153 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 GAFA1Q96PS6 74 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 XCL2Q9UBD3 114 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 TCTEX1D4Q5JR98 221 aa5.14□□□□□ -1.59
GABRB3-218ENST00000635994 GLRX5Q86SX6 157 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms