RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 ZSWIM8A7E2V4 1837 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 VWC2LB2RUY7 222 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 CTSBP07858 339 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 LINC00271P0C7V0 271 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 PLNP26678 52 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 RPL36AP83881 106 aaKnown RBP8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 RPL36ALQ969Q0 106 aaKnown RBP8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 IQCF6A8MYZ5 107 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 POU2AF1Q16633 256 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 TREML4Q6UXN2 200 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 TRAV8-1A0A0A6YYK1 113 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 M0R2P5 195 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 EVI2AP22794 236 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 CHCHD2Q9Y6H1 151 aaPredicted RBP8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 ARID1BQ8NFD5 2236 aaPredicted RBP8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 TMEM126AQ9H061 195 aa8.09□□□□□ -1.11
SPTAN1-228ENST00000635853 TIMM23O14925 209 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 PPIFP30405 207 aaKnown RBP8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 MGST2Q99735 147 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 SCRT1Q9BWW7 348 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 CKAP5Q14008 2032 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 A0A1W2PR77 199 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 HIST1H4AP62805 103 aaKnown RBP8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 PRCDQ00LT1 54 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 LINC01356Q8N9X3 169 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 UBE2E2Q96LR5 201 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 H0YJW9 148 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 GATA2P23769 480 aaPredicted RBP8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 Q6ZS49 121 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 GFRA4Q9GZZ7 299 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 SBF1O95248 1867 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 NRXN2Q9P2S2 1712 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 SS18Q15532 418 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 ATXN8Q156A1 80 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 SFTA2Q6UW10 78 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 COL11A2P13942 1736 aaPredicted RBP8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 TDRD15B5MCY1 1934 aaKnown RBP8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 ERCC8Q13216 396 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 SPATA31B1PQ5VZV4 182 aa8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 MCRIP2Q9BUT9 160 aaKnown RBP8.08□□□□□ -1.12
SPTAN1-228ENST00000635853 IGKV1-5P01602 117 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 HERV-K104P63124 156 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 PSG7Q13046 419 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 ORMDL2Q53FV1 153 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 SLC25A48Q6ZT89 311 aaKnown RBP8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 CEND1Q8N111 149 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 CACNG8Q8WXS5 425 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 UPK2O00526 184 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 C8orf86Q6ZUL3 223 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 FAM110DQ8TAY7 271 aaPredicted RBP8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 LCTP09848 1927 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 WIPF3A6NGB9 483 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 ZNF114Q8NC26 417 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 CLPSP04118 112 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 DEFB130BP0DP73 79 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 DEFB130AP0DP74 79 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 TAL2Q16559 108 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 C6orf226Q5I0X4 101 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 RASL10AQ92737 203 aa8.07□□□□□ -1.12
SPTAN1-228ENST00000635853 SUMO4Q6EEV6 95 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 RNF144BQ7Z419 303 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 PIP4P2Q8N4L2 257 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 WIPF2Q8TF74 440 aaPredicted RBP8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 SP5Q6BEB4 398 aaPredicted RBP8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 BRD3OSQ6XYD6 125 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 ZCCHC24Q8N2G6 241 aaKnown RBP8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 ZMAT4Q9H898 229 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 TNFRSF6BO95407 300 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 LGALS9BQ3B8N2 356 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 LGALS9CQ6DKI2 356 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 C15orf61A6NNL5 157 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 LGALS1P09382 135 aaKnown RBP8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 KLRD1Q13241 179 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 RBMY1FQ15415 496 aaKnown RBP8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 IMMP1LQ96LU5 166 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 H3BUX3 64 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 ZNF561-AS1K7EIQ3 104 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 SLC25A16P16260 332 aa8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 ZFP36L1Q07352 338 aaKnown RBP8.06□□□□□ -1.12
SPTAN1-228ENST00000635853 A0A0G2JRQ6 117 aa8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 F5H768 121 aa8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 TMEM190Q8WZ59 177 aa8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 DOCK4Q8N1I0 1966 aa8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 TRBV20-1A0A075B6N2 111 aa8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 LMO1P25800 156 aa8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 DAD1P61803 113 aa8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 H3BMG7 143 aa8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 ZNF672Q499Z4 452 aaPredicted RBP8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 NKAPP1Q8N9T2 125 aa8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 IGHV1-18A0A0C4DH31 117 aa8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 ARTNQ5T4W7 220 aa8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 Q71RC1 249 aaPredicted RBP8.05□□□□□ -1.12
SPTAN1-228ENST00000635853 SIGLEC8Q9NYZ4 499 aa8.04□□□□□ -1.12
SPTAN1-228ENST00000635853 ZNF876PQ49A33 203 aa8.04□□□□□ -1.12
SPTAN1-228ENST00000635853 DEFB104AQ8WTQ1 72 aa8.04□□□□□ -1.12
SPTAN1-228ENST00000635853 ERG28Q9UKR5 140 aa8.04□□□□□ -1.12
SPTAN1-228ENST00000635853 PSG8Q9UQ74 426 aa8.04□□□□□ -1.12
SPTAN1-228ENST00000635853 PRB4P10163 310 aaPredicted RBP8.04□□□□□ -1.12
SPTAN1-228ENST00000635853 CTRLP40313 264 aa8.04□□□□□ -1.12
SPTAN1-228ENST00000635853 CYYR1Q96J86 154 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms