RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 FAM223BA6NKX1 122 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 IGHV3-53P01767 116 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 SAA4P35542 130 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 FAM223AQ8IWN6 122 aa10.43□□□□□ -0.74
SCN8A-209ENST00000627620 C11orf68Q9H3H3 251 aaKnown RBP10.43□□□□□ -0.74
SCN8A-209ENST00000627620 C15orf62A8K5M9 175 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 SLC25A16P16260 332 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 Q6ZS49 121 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 LINC01356Q8N9X3 169 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 TOMM40O96008 361 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 RIPPLY3P57055 190 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 CKS1BP61024 79 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 ACACAQ13085 2346 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 COLCA2A8K830 154 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 UBE2DNLQ8IWF7 75 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 RHPN1-AS1Q9BWJ2 59 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 TRPM7Q96QT4 1865 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 TMEM155Q4W5P6 130 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 DPH3P1Q9H4G8 78 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 IGKV1-16P04430 117 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 RNASE2P10153 161 aaKnown RBP10.42□□□□□ -0.74
SCN8A-209ENST00000627620 S100A7L2Q5SY68 101 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 HIST3H2BBQ8N257 126 aa10.42□□□□□ -0.74
SCN8A-209ENST00000627620 A0A0G2JRQ6 117 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 RASL11AQ6T310 242 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 DMRTC2Q8IXT2 367 aaPredicted RBP10.41□□□□□ -0.74
SCN8A-209ENST00000627620 NUP35Q8NFH5 326 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 OR2K2Q8NGT1 345 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 DOPEY2Q9Y3R5 2298 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 TRAV8-1A0A0A6YYK1 113 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 PRTN3P24158 256 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 TDGF1P3P51864 188 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 MSRB2Q9Y3D2 182 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 POLEQ07864 2286 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 MLANAQ16655 118 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 LINC01559Q495D7 138 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 UBE2E2Q96LR5 201 aa10.41□□□□□ -0.74
SCN8A-209ENST00000627620 AMBPP02760 352 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 HSD52Q0P140 79 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 DEFB121Q5J5C9 76 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 LYPD1Q8N2G4 141 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 MEGF9Q9H1U4 602 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 LSM4Q9Y4Z0 139 aaKnown RBP10.4□□□□□ -0.74
SCN8A-209ENST00000627620 A0A1B0GV72 72 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 ASCL4Q6XD76 172 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 C14orf178Q8N769 122 aaPredicted RBP10.4□□□□□ -0.74
SCN8A-209ENST00000627620 M0R2P5 195 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 PRR30Q53SZ7 412 aaPredicted RBP10.4□□□□□ -0.74
SCN8A-209ENST00000627620 ZNF479Q96JC4 524 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 MS4A6AQ9H2W1 248 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 NPC2P61916 151 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 Q6ZRM9 215 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 LY96Q9Y6Y9 160 aa10.4□□□□□ -0.74
SCN8A-209ENST00000627620 VCYO14598 125 aa10.4□□□□□ -0.75
SCN8A-209ENST00000627620 TEX43Q6ZNM6 134 aa10.4□□□□□ -0.75
SCN8A-209ENST00000627620 OVOL3O00110 214 aa10.39□□□□□ -0.75
SCN8A-209ENST00000627620 INSP01308 110 aa10.39□□□□□ -0.75
SCN8A-209ENST00000627620 GGTLC3B5MD39 225 aa10.39□□□□□ -0.75
SCN8A-209ENST00000627620 TMEM238C9JI98 176 aa10.39□□□□□ -0.75
SCN8A-209ENST00000627620 DTX1Q86Y01 620 aa10.39□□□□□ -0.75
SCN8A-209ENST00000627620 PHLDA1Q8WV24 401 aaPredicted RBP10.39□□□□□ -0.75
SCN8A-209ENST00000627620 HS3ST6Q96QI5 342 aa10.39□□□□□ -0.75
SCN8A-209ENST00000627620 ERG28Q9UKR5 140 aa10.39□□□□□ -0.75
SCN8A-209ENST00000627620 CST9LQ9H4G1 147 aa10.39□□□□□ -0.75
SCN8A-209ENST00000627620 DAZ1Q9NQZ3 744 aaKnown RBP10.39□□□□□ -0.75
SCN8A-209ENST00000627620 JPT2Q9H910 190 aa10.39□□□□□ -0.75
SCN8A-209ENST00000627620 ZNRD1Q9P1U0 126 aa10.39□□□□□ -0.75
SCN8A-209ENST00000627620 FHL1Q13642 323 aa10.38□□□□□ -0.75
SCN8A-209ENST00000627620 RUSC1-AS1Q66K80 236 aa10.38□□□□□ -0.75
SCN8A-209ENST00000627620 RNF166Q96A37 237 aaPredicted RBP10.38□□□□□ -0.75
SCN8A-209ENST00000627620 C1QTNF4Q9BXJ3 329 aa10.38□□□□□ -0.75
SCN8A-209ENST00000627620 CSTL1Q9H114 145 aa10.38□□□□□ -0.75
SCN8A-209ENST00000627620 RIF1Q5UIP0 2472 aaKnown RBP10.38□□□□□ -0.75
SCN8A-209ENST00000627620 SYNJ2BPP57105 145 aa10.38□□□□□ -0.75
SCN8A-209ENST00000627620 MPDZO75970 2070 aa10.38□□□□□ -0.75
SCN8A-209ENST00000627620 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
SCN8A-209ENST00000627620 K7ENP7 123 aa10.38□□□□□ -0.75
SCN8A-209ENST00000627620 TNFSF13O75888 250 aa10.38□□□□□ -0.75
SCN8A-209ENST00000627620 SEC11AP67812 179 aa10.38□□□□□ -0.75
SCN8A-209ENST00000627620 PLEKHB2Q96CS7 222 aa10.38□□□□□ -0.75
SCN8A-209ENST00000627620 SRSF8Q9BRL6 282 aaKnown RBP10.38□□□□□ -0.75
SCN8A-209ENST00000627620 NDUFS8O00217 210 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 RPRMLQ8N4K4 120 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 MYO7BQ6PIF6 2116 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 COL6A6A6NMZ7 2263 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 A0A1W2PPI3 338 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 ERCC8Q13216 396 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 SAMD5Q5TGI4 173 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 SP5Q6BEB4 398 aaPredicted RBP10.37□□□□□ -0.75
SCN8A-209ENST00000627620 PAX4O43316 350 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 SHANK2-AS3Q9BTD1 123 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 A8MWV9 139 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 FNDC10F2Z333 226 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 ATXN8Q156A1 80 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 C1orf159Q96HA4 380 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 A0A087WWL8 130 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 TMEM256Q8N2U0 113 aa10.37□□□□□ -0.75
SCN8A-209ENST00000627620 MSMBP08118 114 aa10.36□□□□□ -0.75
SCN8A-209ENST00000627620 RASL10AQ92737 203 aa10.36□□□□□ -0.75
SCN8A-209ENST00000627620 ITGB1BP1O14713 200 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms