RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	DUXB	A0A1W2PPF3	345 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	C7orf66	A4D0T2	115 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	ZNF98	A6NK75	572 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	PMS2P5	A8MQ11	134 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	CENPX	A8MT69	81 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	PRAC2	D3DTV9	90 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171		H3BRN7	92 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171		K7EPK0	472 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171		L7N2F9	121 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	GOSR2	O14653	212 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	MED6	O75586	246 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	IFNA21	P01568	189 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	TCRB	P04435	133 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	H2AFB2	P0C5Z0	115 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	HLA-DRB4	P13762	266 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	ATF4	P18848	351 aa	Predicted RBP	3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	VAMP2	P63027	116 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	IFITM3	Q01628	133 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	C12orf74	Q32Q52	190 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	GCSAML	Q5JQS6	135 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	SPATA31B1P	Q5VZV4	182 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	MIC13	Q5XKP0	118 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	PATE2	Q6UY27	113 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	LRTM2	Q8N967	370 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	ZNF709	Q8N972	641 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	CSNK1G2-AS1	Q8NCQ2	148 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	THAP6	Q8TBB0	222 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	GATAD1	Q8WUU5	269 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	TRGV9	Q99603	122 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	MGST2	Q99735	147 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	C11orf68	Q9H3H3	251 aa	Known RBP	3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	HIGD1A	Q9Y241	93 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	KLK5	Q9Y337	293 aa	Predicted RBP	3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	RFNG	Q9Y644	331 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	HLA-DRB4	X5D2U9	266 aa		3.21	□□□□□ -1.9
LINC00649-219	ENST00000622171	PCLO	Q9Y6V0	5065 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	IGHV4-4	A0A075B6R2	117 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	TRAV2	A0A0B4J234	112 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171		A0A0J9YX75	114 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	LOC102723971	A0A1B0GUV8	181 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	FAM240B	A0A1B0GVZ2	78 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	NAP1L6	A6NFF2	107 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	SNRPGP15	A8MWD9	76 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	AGPAT2	O15120	278 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	COX7A2P2	O60397	106 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	PYY	P10082	97 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	AZU1	P20160	251 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	GPX4	P36969	197 aa	Predicted RBP	3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	GALR1	P47211	349 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	PSMB3	P49720	205 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	CNN1	P51911	297 aa	Known RBP	3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	RAP2B	P61225	183 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	RHOB	P62745	196 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	ID3	Q02535	119 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	BAX	Q07812	192 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	RAB32	Q13637	225 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	CLINT1	Q14677	625 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	ZNF846	Q147U1	533 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	OPCML	Q14982	345 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	FAM222A	Q5U5X8	452 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	TMEM14EP	Q6UXP3	125 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	NOXA1	Q86UR1	476 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	C1orf158	Q8N1D5	194 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	C12orf45	Q8N5I9	185 aa	Predicted RBP	3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	OR11H7	Q8NGC8	314 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	ENKUR	Q8TC29	256 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	ZNF431	Q8TF32	576 aa	Predicted RBP	3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	BLNK	Q8WV28	456 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	MITD1	Q8WV92	249 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	CIB3	Q96Q77	187 aa	Predicted RBP	3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	TMEM208	Q9BTX3	173 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	SMIM3	Q9BZL3	60 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	ARV1	Q9H2C2	271 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	SAV1	Q9H4B6	383 aa	Predicted RBP	3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	GPN1	Q9HCN4	374 aa	Predicted RBP	3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	OR5AC2	Q9NZP5	309 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	MGAT4C	Q9UBM8	478 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	LRP1B	Q9NZR2	4599 aa		3.2	□□□□□ -1.9
LINC00649-219	ENST00000622171	APOB	P04114	4563 aa	Known RBP	3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	DEFB131B	A0A096LNP1	70 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	ZNF705E	A8MWA4	302 aa	Predicted RBP	3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171		H3BQ15	152 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	ZNF701	M0R085	212 aa	Predicted RBP	3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171		M0R3E3	92 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	HYPM	O75409	117 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	FABP1	P07148	127 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	DEFB130B	P0DP73	79 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	DEFB130A	P0DP74	79 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	SLC25A6	P12236	298 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	MIF	P14174	115 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	FGF7	P21781	194 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	ID1	P41134	155 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	RPP30	P78346	268 aa	Known RBP	3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	DLK1	P80370	383 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	PSG9	Q00887	426 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	NHLH2	Q02577	135 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	ERCC8	Q13216	396 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	EBLN2	Q6P2I7	272 aa		3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	MORN3	Q6PF18	240 aa	Predicted RBP	3.19	□□□□□ -1.9
LINC00649-219	ENST00000622171	AMTN	Q6UX39	209 aa		3.19	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms