RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 RNASEH2CQ8TDP1 164 aaKnown RBP8.21□□□□□ -1.1
VPS11-208ENST00000621676 RABAC1Q9UI14 185 aa8.21□□□□□ -1.1
VPS11-208ENST00000621676 F6UB75 175 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 MPDU1O75352 247 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 S100A6P06703 90 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 TAS2R45P59539 299 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 SNRPEP62304 92 aaKnown RBP8.2□□□□□ -1.1
VPS11-208ENST00000621676 TMEM75Q8N9X5 138 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 SMCO4Q9NRQ5 59 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 MOB4Q9Y3A3 225 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 CLDN34H7C241 214 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 GNG4P50150 75 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 NDUFA6P56556 154 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 ERCC8Q13216 396 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 VWC2Q2TAL6 325 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 TOMM20LQ6UXN7 152 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 Q6ZQT7 251 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 MRPL41Q8IXM3 137 aaKnown RBP8.2□□□□□ -1.1
VPS11-208ENST00000621676 ZNF491Q8N8L2 437 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 SGMS2Q8NHU3 365 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 THYN1Q9P016 225 aa8.2□□□□□ -1.1
VPS11-208ENST00000621676 UBE2G1P62253 170 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 ETFRF1Q6IPR1 90 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 BAGE2Q86Y30 109 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 NDUFS8O00217 210 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 ATP5G2Q06055 141 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 STXBP6Q8NFX7 210 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 FAM167A-AS1Q96KT0 104 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 Q9H3A6 140 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 ZNF586Q9NXT0 402 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 NUDT19A8MXV4 375 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 NDUFA3O95167 84 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 HIST1H2BAQ96A08 127 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 C12orf57Q99622 126 aa8.19□□□□□ -1.1
VPS11-208ENST00000621676 SLC25A16P16260 332 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 ARL3P36405 182 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 GALR1P47211 349 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 C8orf31Q8N9H6 132 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 OR4X2Q8NGF9 303 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 OR5R1Q8NH85 324 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 SDF2L1Q9HCN8 221 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 GPX4P36969 197 aaPredicted RBP8.18□□□□□ -1.1
VPS11-208ENST00000621676 SYNJ2BPP57105 145 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 GFI1BQ5VTD9 330 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 TMEM116Q8NCL8 245 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 NPBQ8NG41 125 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 CCDC140Q96MF4 163 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 NAGKQ9UJ70 344 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 CARHSP1Q9Y2V2 147 aaKnown RBP8.18□□□□□ -1.1
VPS11-208ENST00000621676 TBL2Q9Y4P3 447 aaKnown RBP8.18□□□□□ -1.1
VPS11-208ENST00000621676 IGLV11-55A0A075B6I3 123 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 GRIFINA4D1Z8 144 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 K7EN84 100 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 FAM71F2Q6NXP2 309 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 GGACTQ9BVM4 153 aa8.18□□□□□ -1.1
VPS11-208ENST00000621676 ZNF705GA8MUZ8 300 aaPredicted RBP8.17□□□□□ -1.1
VPS11-208ENST00000621676 F8W735 103 aaPredicted RBP8.17□□□□□ -1.1
VPS11-208ENST00000621676 AARDQ4LEZ3 155 aa8.17□□□□□ -1.1
VPS11-208ENST00000621676 AKAP9Q99996 3911 aa8.17□□□□□ -1.1
VPS11-208ENST00000621676 COLCA2A8K830 154 aa8.17□□□□□ -1.1
VPS11-208ENST00000621676 CYB5R2Q6BCY4 276 aa8.17□□□□□ -1.1
VPS11-208ENST00000621676 LINC01551Q86U37 167 aa8.17□□□□□ -1.1
VPS11-208ENST00000621676 SSBP4Q9BWG4 385 aaPredicted RBP8.17□□□□□ -1.1
VPS11-208ENST00000621676 CR1P17927 2039 aa8.17□□□□□ -1.1
VPS11-208ENST00000621676 OR4F17Q8NGA8 305 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 FXYD5Q96DB9 178 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 NAT8Q9UHE5 227 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 TRAV20A0A0B4J274 112 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 INAFM1C9JVW0 142 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 PRAC2D3DTV9 90 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 CBLN1P23435 193 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 Q8N6K4 173 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 PFDN5Q99471 154 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 BIN3Q9NQY0 253 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 NPIPB5A8MRT5 1133 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 TGOLN2O43493 480 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 MT-ND4LP03901 98 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 FABP9Q0Z7S8 132 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 COMMD1Q8N668 190 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 TMEM68Q96MH6 324 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 MANBALQ9NQG1 85 aa8.16□□□□□ -1.1
VPS11-208ENST00000621676 HLA-DRB1P01911 266 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 RAB5AP20339 215 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 IER3P46695 156 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 FXYD7P58549 80 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 KIR3DS1Q14943 382 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 RHEBQ15382 184 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 BPIFA4PQ86YQ2 179 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 FAM210BQ96KR6 192 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 KCNIP2Q9NS61 270 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 SEC14L6B5MCN3 397 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 IGF1P05019 195 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 RAB9AP51151 201 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 SELENOTP62341 195 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 ELOBQ15370 118 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 LINC00322Q6ZN03 302 aaPredicted RBP8.15□□□□□ -1.1
VPS11-208ENST00000621676 C8orf49Q96NF6 230 aa8.15□□□□□ -1.1
VPS11-208ENST00000621676 PRM2P04554 102 aa8.14□□□□□ -1.11
VPS11-208ENST00000621676 CNN1P51911 297 aaKnown RBP8.14□□□□□ -1.11
VPS11-208ENST00000621676 NSUN5P1Q3KNT7 163 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms