RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 DOCK7Q96N67 2140 aa4.12□□□□□ -1.75
VPS13D-214ENST00000620676 H0YJW9 148 aa4.12□□□□□ -1.75
VPS13D-214ENST00000620676 SMIM10L1P0DMW3 83 aa4.12□□□□□ -1.75
VPS13D-214ENST00000620676 MORN2Q502X0 79 aa4.12□□□□□ -1.75
VPS13D-214ENST00000620676 ITLN1Q8WWA0 313 aa4.12□□□□□ -1.75
VPS13D-214ENST00000620676 SMIM10Q96HG1 83 aa4.12□□□□□ -1.75
VPS13D-214ENST00000620676 A0A1W2PQD3 144 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 NDUFV3P56181 108 aaKnown RBP4.11□□□□□ -1.75
VPS13D-214ENST00000620676 RRN3P1Q2M238 152 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 MYMXA0A1B0GTQ4 84 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 LINC00477Q96M19 166 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 hCG_38984A0A1B0GV85 526 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 ANKRD36A6QL64 1941 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 CSRP1P21291 193 aaKnown RBP4.11□□□□□ -1.75
VPS13D-214ENST00000620676 PRDM6Q9NQX0 595 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 CCL4P13236 92 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 DUSP23Q9BVJ7 150 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 MRPL35Q9NZE8 188 aaKnown RBP4.11□□□□□ -1.75
VPS13D-214ENST00000620676 SMIM27A0A1W2PRY6 76 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 GDF5OSQ5U4N7 250 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 TMEM14EPQ6UXP3 125 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 IL17RELQ6ZVW7 336 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 FAM106CPP0CH98 169 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 FAM106AQ4KMX7 169 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 CCL1P22362 96 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 PCOLCEQ15113 449 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 ZNF497Q6ZNH5 498 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 FBLN5Q9UBX5 448 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 TRGV5A0A0B4J1U4 118 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 LINC00473A8K010 186 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 INSL3P51460 131 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 RFPL3SP0C7P2 107 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 NPPCP23582 126 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 C1orf210Q8IVY1 113 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 COA6Q5JTJ3 125 aaKnown RBP4.11□□□□□ -1.75
VPS13D-214ENST00000620676 FOXI2Q6ZQN5 318 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 CTHRC1Q96CG8 243 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 TMEM101Q96IK0 257 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 MRPL27Q9P0M9 148 aaKnown RBP4.11□□□□□ -1.75
VPS13D-214ENST00000620676 SDK2Q58EX2 2172 aa4.11□□□□□ -1.75
VPS13D-214ENST00000620676 FOXC1Q12948 553 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 SPXQ9BT56 116 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 POLR2AP24928 1970 aaKnown RBP4.1□□□□□ -1.75
VPS13D-214ENST00000620676 FGF6P10767 208 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 C10orf128Q5T292 105 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 ANKRD29Q8N6D5 301 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 TP53TG3Q9ULZ0 132 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 PMS2P5A8MQ11 134 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 GGTLC3B5MD39 225 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 UPK2O00526 184 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 LMO7DNF2Z398 122 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 RNASE13Q5GAN3 156 aaKnown RBP4.1□□□□□ -1.75
VPS13D-214ENST00000620676 ARTNQ5T4W7 220 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 IGFBPL1Q8WX77 278 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 PROK2Q9HC23 129 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 TOMM7Q9P0U1 55 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 RNF182Q8N6D2 247 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 IGKV1-39P01597 117 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 IGKV1D-39P04432 117 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 FAM120AOSQ5T036 256 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 METTL26Q96S19 204 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 TDRD6O60522 2096 aaKnown RBP4.1□□□□□ -1.75
VPS13D-214ENST00000620676 PTPRDP23468 1912 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 H7C1H1 209 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 EFNA2O43921 213 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 SLC25A48Q6ZT89 311 aaKnown RBP4.1□□□□□ -1.75
VPS13D-214ENST00000620676 WIPF2Q8TF74 440 aaPredicted RBP4.1□□□□□ -1.75
VPS13D-214ENST00000620676 NRAPQ86VF7 1730 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 FOXI1Q12951 378 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 ZCCHC24Q8N2G6 241 aaKnown RBP4.1□□□□□ -1.75
VPS13D-214ENST00000620676 FAM216BQ8N7L0 139 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 HEATR5BQ9P2D3 2071 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 NTN5Q8WTR8 489 aaPredicted RBP4.1□□□□□ -1.75
VPS13D-214ENST00000620676 FABP5P3A8MUU1 101 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 ZFP2Q6ZN57 461 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 Q6ZUT4 128 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 YPEL4Q96NS1 127 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 TMEM133Q9H2Q1 129 aa4.1□□□□□ -1.75
VPS13D-214ENST00000620676 FAM90A20PA6NIJ5 464 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 LINC00694P0DN24 101 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 KLHL30-AS1Q8NEE0 82 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 MYO7BQ6PIF6 2116 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 CXCL12P48061 93 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 C14orf178Q8N769 122 aaPredicted RBP4.09□□□□□ -1.75
VPS13D-214ENST00000620676 RNF166Q96A37 237 aaPredicted RBP4.09□□□□□ -1.75
VPS13D-214ENST00000620676 CASP8AP2Q9UKL3 1982 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 SLC25A20O43772 301 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 ETV2O00321 342 aaPredicted RBP4.09□□□□□ -1.75
VPS13D-214ENST00000620676 SHISA2Q6UWI4 295 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 WDR83OSQ9Y284 106 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 PLNP26678 52 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 EEF1AKMT3Q96AZ1 226 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 IGHV1-45A0A0A0MS14 117 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 A0A1B0GX51 115 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 UBE2L6O14933 153 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 RALGAPA1Q6GYQ0 2036 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 GLI3P10071 1580 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 SONP18583 2426 aaKnown RBP4.09□□□□□ -1.75
VPS13D-214ENST00000620676 LILRA6Q6PI73 481 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms