RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SAMD5Q5TGI4 173 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 VWC2LB2RUY7 222 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 NPC2P61916 151 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 HSD52Q0P140 79 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 ZNF876PQ49A33 203 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 GAGE13Q4V321 117 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 PCP4P48539 62 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 FOXF2Q12947 444 aa9.2□□□□□ -0.94
CCDC144B-208ENST00000618081 BUB1B-PAK6H3BSN5 160 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 MLNRO43193 412 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 UNQ6494/PRO21346Q6UXR6 183 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 FCN3O75636 299 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 PSG1P11464 419 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 IFITM2Q01629 132 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 C5orf64Q2M2E5 130 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 CD300EQ496F6 205 aaPredicted RBP9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 LCN12Q6JVE5 192 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 DEPPQ9NTK1 212 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 GNLYP22749 145 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 EXOC3-AS1Q8N2X6 119 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 A0A0G2JNJ9 132 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 BMPERQ8N8U9 685 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 LYZL4Q96KX0 146 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 SRSF8Q9BRL6 282 aaKnown RBP9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 Q9UFV3 132 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 A0A1B0GWJ7 208 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 GAGE2EQ4V326 116 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 EDA2RQ9HAV5 297 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 GAGE2DQ9UEU5 116 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 LINC00527Q9UJ94 153 aa9.19□□□□□ -0.94
CCDC144B-208ENST00000618081 FOXL1Q12952 345 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 FBLN5Q9UBX5 448 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 PRR14LQ5THK1 2151 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 NDUFS8O00217 210 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 TMEM155Q4W5P6 130 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 NR2C2APQ86WQ0 139 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 MEGF9Q9H1U4 602 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 SORL1Q92673 2214 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 D6R8Y8 96 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 RPUSD1Q9UJJ7 312 aaKnown RBP9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 E9PQ18 207 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 KLRD1Q13241 179 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 SUMO4Q6EEV6 95 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 LYPD1Q8N2G4 141 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 ZFAND6Q6FIF0 208 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 ANAPC10Q9UM13 185 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 FXYD7P58549 80 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 TMEM249Q2WGJ8 235 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 SIGMAR1Q99720 223 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 SCRT1Q9BWW7 348 aa9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 DAZ1Q9NQZ3 744 aaKnown RBP9.18□□□□□ -0.94
CCDC144B-208ENST00000618081 MYMXA0A1B0GTQ4 84 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 NTN3O00634 580 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 C1QTNF9P0C862 333 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 OCC1Q8TAD7 63 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 ZNF561-AS1K7EIQ3 104 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 APOC4P55056 127 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 ZNF474Q6S9Z5 364 aaPredicted RBP9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 CREBBPQ92793 2442 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 PSG3Q16557 428 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 LSM4Q9Y4Z0 139 aaKnown RBP9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 A8MXK9 166 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 CD59P13987 128 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 NDPQ00604 133 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 C1orf159Q96HA4 380 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 ZNF479Q96JC4 524 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 SPG11Q96JI7 2443 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 FAM90A2PQ658T7 463 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 SUPT4H1P63272 117 aaKnown RBP9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
CCDC144B-208ENST00000618081 IGHV3-53P01767 116 aa9.16□□□□□ -0.94
CCDC144B-208ENST00000618081 AMBPP02760 352 aa9.16□□□□□ -0.94
CCDC144B-208ENST00000618081 RBMY1FQ15415 496 aaKnown RBP9.16□□□□□ -0.94
CCDC144B-208ENST00000618081 PTPRQQ9UMZ3 2332 aa9.16□□□□□ -0.94
CCDC144B-208ENST00000618081 GGNQ86UU5 652 aa9.16□□□□□ -0.94
CCDC144B-208ENST00000618081 RNF126Q9BV68 326 aa9.16□□□□□ -0.94
CCDC144B-208ENST00000618081 TMEM242Q9NWH2 141 aa9.16□□□□□ -0.94
CCDC144B-208ENST00000618081 H0YJW9 148 aa9.16□□□□□ -0.94
CCDC144B-208ENST00000618081 BRD3OSQ6XYD6 125 aa9.16□□□□□ -0.94
CCDC144B-208ENST00000618081 TREML4Q6UXN2 200 aa9.16□□□□□ -0.94
CCDC144B-208ENST00000618081 TIMM21Q9BVV7 248 aa9.15□□□□□ -0.94
CCDC144B-208ENST00000618081 GGTLC1Q9BX51 225 aa9.15□□□□□ -0.94
CCDC144B-208ENST00000618081 RIPPLY3P57055 190 aa9.15□□□□□ -0.94
CCDC144B-208ENST00000618081 UBE2E2Q96LR5 201 aa9.15□□□□□ -0.94
CCDC144B-208ENST00000618081 NKAPP1Q8N9T2 125 aa9.15□□□□□ -0.94
CCDC144B-208ENST00000618081 ZNF48Q96MX3 618 aaPredicted RBP9.15□□□□□ -0.94
CCDC144B-208ENST00000618081 GSN-AS1Q9NRJ2 163 aa9.15□□□□□ -0.94
CCDC144B-208ENST00000618081 TFF1P04155 84 aa9.15□□□□□ -0.95
CCDC144B-208ENST00000618081 MPZP25189 248 aa9.15□□□□□ -0.95
CCDC144B-208ENST00000618081 SAA4P35542 130 aa9.15□□□□□ -0.95
CCDC144B-208ENST00000618081 RPRMLQ8N4K4 120 aa9.15□□□□□ -0.95
CCDC144B-208ENST00000618081 RMI2Q96E14 147 aa9.15□□□□□ -0.95
CCDC144B-208ENST00000618081 DSCAML1Q8TD84 2053 aa9.15□□□□□ -0.95
CCDC144B-208ENST00000618081 PINLYPA6NC86 204 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 DAD1P61803 113 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 DLX4Q92988 240 aaPredicted RBP9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 RFNGQ9Y644 331 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 RNF222A6NCQ9 220 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 SH2D1AO60880 128 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 PDE6HQ13956 83 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms