RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 RBFOX3A6NFN3 312 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 F8VVB4 439 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 F8VWA3 439 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 UBE2BP63146 152 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 GAGE1Q13065 139 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 GAGE4Q13068 117 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 GAGE5Q13069 117 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 CLDN16Q9Y5I7 305 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 ICOSQ9Y6W8 199 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 TRAV34A0A0B4J273 112 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 ANAPC1Q9H1A4 1944 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 IER3P46695 156 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 FER1L6-AS1Q8NA97 138 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 IGHV7-4-1A0A0J9YVY3 117 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 FAM90A9PA6NNJ1 464 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 SLC25A20O43772 301 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 MPZP25189 248 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 NHLRC3Q5JS37 347 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 GCHFRP30047 84 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 ZNF138P52744 262 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 AANATQ16613 207 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 DPPA3Q6W0C5 159 aa8.72□□□□□ -1.01
POLR2A-209ENST00000617998 NDUFB4O95168 129 aa8.71□□□□□ -1.01
POLR2A-209ENST00000617998 IFI27P40305 119 aaPredicted RBP8.71□□□□□ -1.01
POLR2A-209ENST00000617998 OR11H6Q8NGC7 330 aa8.71□□□□□ -1.01
POLR2A-209ENST00000617998 ZNF503-AS2A6NEH8 195 aa8.71□□□□□ -1.01
POLR2A-209ENST00000617998 FMC1Q96HJ9 113 aa8.71□□□□□ -1.01
POLR2A-209ENST00000617998 TMEM70Q9BUB7 260 aa8.71□□□□□ -1.01
POLR2A-209ENST00000617998 PNRC2Q9NPJ4 139 aaKnown RBP8.71□□□□□ -1.01
POLR2A-209ENST00000617998 TOMM40O96008 361 aa8.71□□□□□ -1.02
POLR2A-209ENST00000617998 P2RY4P51582 365 aa8.71□□□□□ -1.02
POLR2A-209ENST00000617998 SSBP2P81877 361 aaPredicted RBP8.71□□□□□ -1.02
POLR2A-209ENST00000617998 M0R2Z0 102 aa8.71□□□□□ -1.02
POLR2A-209ENST00000617998 UBE2CO00762 179 aa8.71□□□□□ -1.02
POLR2A-209ENST00000617998 ICMTO60725 284 aa8.71□□□□□ -1.02
POLR2A-209ENST00000617998 APRG1Q8IVJ8 170 aa8.71□□□□□ -1.02
POLR2A-209ENST00000617998 OR4D5Q8NGN0 318 aa8.71□□□□□ -1.02
POLR2A-209ENST00000617998 PMS2P5A8MQ11 134 aa8.71□□□□□ -1.02
POLR2A-209ENST00000617998 PEX7O00628 323 aa8.71□□□□□ -1.02
POLR2A-209ENST00000617998 WISP2O76076 250 aa8.71□□□□□ -1.02
POLR2A-209ENST00000617998 PPIFP30405 207 aaKnown RBP8.71□□□□□ -1.02
POLR2A-209ENST00000617998 MALRD1Q5VYJ5 2156 aa8.71□□□□□ -1.02
POLR2A-209ENST00000617998 HLA-DQA1P01909 254 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 FAM74A3Q4VXF1 159 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 IGKV1-27A0A075B6S5 117 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 IGHV4OR15-8A0A075B7B6 117 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 A0A087WW49 117 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 IGKV1D-13A0A0B4J2D9 117 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 ETV2O00321 342 aaPredicted RBP8.7□□□□□ -1.02
POLR2A-209ENST00000617998 IGKV1-13P0DP09 117 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 LINC00311Q8N616 119 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 ANAPC16Q96DE5 110 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 C1orf43Q9BWL3 253 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 LRRK2Q5S007 2527 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 TMEM250H0YL14 139 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 ABCA2Q9BZC7 2435 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 MRPL23Q16540 153 aaKnown RBP8.7□□□□□ -1.02
POLR2A-209ENST00000617998 VCX2Q9H322 139 aa8.7□□□□□ -1.02
POLR2A-209ENST00000617998 H3BVH4 76 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 IGKV2-40A0A087WW87 121 aaPredicted RBP8.69□□□□□ -1.02
POLR2A-209ENST00000617998 DEFB4AO15263 64 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 IGKV2D-40P01614 121 aaPredicted RBP8.69□□□□□ -1.02
POLR2A-209ENST00000617998 IQCJQ1A5X6 159 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 LINC00299Q6ZSB3 139 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 PRELID3AQ96N28 172 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 PSMG3-AS1Q96PY0 264 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 NOP10Q9NPE3 64 aaKnown RBP8.69□□□□□ -1.02
POLR2A-209ENST00000617998 HSPB8Q9UJY1 196 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 TMEM170BQ5T4T1 132 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 FREM3P0C091 2139 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 ZNF253O75346 499 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 IGKV1-16P04430 117 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 LMO4P61968 165 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 PHLDA1Q8WV24 401 aaPredicted RBP8.69□□□□□ -1.02
POLR2A-209ENST00000617998 NUDT11Q96G61 164 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 SCRT1Q9BWW7 348 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 C5orf52A6NGY3 159 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 PFN1P07737 140 aaKnown RBP8.69□□□□□ -1.02
POLR2A-209ENST00000617998 KLK9Q9UKQ9 250 aa8.69□□□□□ -1.02
POLR2A-209ENST00000617998 IGHV3-16A0A0C4DH30 117 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 NPIPB5A8MRT5 1133 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 TRGV9Q99603 122 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 ERCC8Q13216 396 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 VPS25Q9BRG1 176 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 CLDN34H7C241 214 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 PRB4P10163 310 aaPredicted RBP8.68□□□□□ -1.02
POLR2A-209ENST00000617998 ZNF876PQ49A33 203 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 TMEM37Q8WXS4 190 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 NPCDR1Q9BY65 106 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 NCOR1P1Q9H4R4 102 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 TOMM20LQ6UXN7 152 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 Q6ZSV7 163 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 MIR17HGQ75NE6 70 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 C5orf66Q9H5L9 145 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 JKAMPQ9P055 326 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 COL4A3Q01955 1670 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 TMEM131Q92545 1883 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 TRAV25A0A0B4J276 109 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 CDKN1BP46527 198 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms