RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 IZUMO1RA6ND01 250 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 Q5XG85 94 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 NUP35Q8NFH5 326 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 CHCHD5Q9BSY4 110 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 HIGD1BQ9P298 99 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 ARHGAP21Q5T5U3 1957 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 A0A0B4J2E0 115 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 A0A0U1RRA0 63 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 A0A1B0GX12 115 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 DHRS3O75911 302 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 CECR9P0C854 216 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 C16orf97H3BN30 126 aa12.37□□□□□ -0.43
NOP56-220ENST00000616692 NUP43Q8NFH3 380 aa12.37□□□□□ -0.43
NOP56-220ENST00000616692 TIMD4Q96H15 378 aa12.37□□□□□ -0.43
NOP56-220ENST00000616692 C1orf147Q96MC9 270 aaPredicted RBP12.37□□□□□ -0.43
NOP56-220ENST00000616692 LHFPL6Q9Y693 200 aa12.37□□□□□ -0.43
NOP56-220ENST00000616692 SMIM27A0A1W2PRY6 76 aa12.37□□□□□ -0.43
NOP56-220ENST00000616692 PRRG2O14669 202 aa12.37□□□□□ -0.43
NOP56-220ENST00000616692 SNRNP200O75643 2136 aaKnown RBP12.37□□□□□ -0.43
NOP56-220ENST00000616692 PPYP01298 95 aa12.37□□□□□ -0.43
NOP56-220ENST00000616692 COX5AP20674 150 aa12.37□□□□□ -0.43
NOP56-220ENST00000616692 CAMPP49913 170 aa12.37□□□□□ -0.43
NOP56-220ENST00000616692 TMEM86BQ8N661 226 aa12.37□□□□□ -0.43
NOP56-220ENST00000616692 GPX7Q96SL4 187 aaPredicted RBP12.37□□□□□ -0.43
NOP56-220ENST00000616692 RNASE7Q9H1E1 156 aaKnown RBP12.37□□□□□ -0.43
NOP56-220ENST00000616692 KLK5Q9Y337 293 aaPredicted RBP12.37□□□□□ -0.43
NOP56-220ENST00000616692 SPENQ96T58 3664 aaKnown RBP12.36□□□□□ -0.43
NOP56-220ENST00000616692 FAM236AA0A1B0GUQ0 79 aa12.36□□□□□ -0.43
NOP56-220ENST00000616692 FAM236BA0A1B0GV22 79 aa12.36□□□□□ -0.43
NOP56-220ENST00000616692 TCRBV4S1A1TA0A5B7 111 aa12.36□□□□□ -0.43
NOP56-220ENST00000616692 PGLYRP1O75594 196 aaPredicted RBP12.36□□□□□ -0.43
NOP56-220ENST00000616692 C3orf22Q8N5N4 141 aa12.36□□□□□ -0.43
NOP56-220ENST00000616692 ZNF740Q8NDX6 193 aa12.36□□□□□ -0.43
NOP56-220ENST00000616692 ANKRD17O75179 2603 aaKnown RBP12.36□□□□□ -0.43
NOP56-220ENST00000616692 CELSR2Q9HCU4 2923 aa12.36□□□□□ -0.43
NOP56-220ENST00000616692 A0A1B0GWA3 101 aa12.36□□□□□ -0.43
NOP56-220ENST00000616692 NKX2-2O95096 273 aa12.36□□□□□ -0.43
NOP56-220ENST00000616692 OR9G1Q8NH87 305 aa12.36□□□□□ -0.43
NOP56-220ENST00000616692 DLX4Q92988 240 aaPredicted RBP12.36□□□□□ -0.43
NOP56-220ENST00000616692 OSTCQ9NRP0 149 aa12.36□□□□□ -0.43
NOP56-220ENST00000616692 M0R2P5 195 aa12.35□□□□□ -0.43
NOP56-220ENST00000616692 IGKV1-8A0A0C4DH67 115 aa12.35□□□□□ -0.43
NOP56-220ENST00000616692 H3BML4 177 aa12.35□□□□□ -0.43
NOP56-220ENST00000616692 SCTP09683 121 aa12.35□□□□□ -0.43
NOP56-220ENST00000616692 NPPBP16860 134 aa12.35□□□□□ -0.43
NOP56-220ENST00000616692 OR1C1Q15619 314 aa12.35□□□□□ -0.43
NOP56-220ENST00000616692 MFSD12Q6NUT3 480 aa12.35□□□□□ -0.43
NOP56-220ENST00000616692 C8orf31Q8N9H6 132 aa12.35□□□□□ -0.43
NOP56-220ENST00000616692 COQ2Q96H96 371 aa12.35□□□□□ -0.43
NOP56-220ENST00000616692 PDZD2O15018 2839 aa12.35□□□□□ -0.43
NOP56-220ENST00000616692 CACNA1CQ13936 2221 aa12.35□□□□□ -0.43
NOP56-220ENST00000616692 PRKNO60260 465 aaPredicted RBP12.34□□□□□ -0.43
NOP56-220ENST00000616692 PDCD6O75340 191 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 FCGR2AP12318 317 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 ZC2HC1BQ5TFG8 222 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 MARCH3Q86UD3 253 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 DNAJB12Q9NXW2 375 aaKnown RBP12.34□□□□□ -0.43
NOP56-220ENST00000616692 LRBAP50851 2863 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 APCP25054 2843 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 CEND1Q8N111 149 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 CHAC1Q9BUX1 264 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 OTOGQ6ZRI0 2925 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 FBXW4P57775 412 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 C12orf74Q32Q52 190 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 PCP2Q8IVA1 136 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 JPT2Q9H910 190 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 AP5S1Q9NUS5 200 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 R4GMQ9 66 aa12.34□□□□□ -0.43
NOP56-220ENST00000616692 SCN3AQ9NY46 2000 aa12.33□□□□□ -0.43
NOP56-220ENST00000616692 FGFRL1Q8N441 504 aa12.33□□□□□ -0.44
NOP56-220ENST00000616692 TAC3Q9UHF0 121 aa12.33□□□□□ -0.44
NOP56-220ENST00000616692 CENPEQ02224 2701 aa12.33□□□□□ -0.44
NOP56-220ENST00000616692 FXYD3Q14802 87 aa12.33□□□□□ -0.44
NOP56-220ENST00000616692 ZNF672Q499Z4 452 aaPredicted RBP12.33□□□□□ -0.44
NOP56-220ENST00000616692 GDF5OSQ5U4N7 250 aa12.33□□□□□ -0.44
NOP56-220ENST00000616692 TREML4Q6UXN2 200 aa12.33□□□□□ -0.44
NOP56-220ENST00000616692 ZGRF1Q86YA3 2104 aa12.33□□□□□ -0.44
NOP56-220ENST00000616692 FAM57AQ8TBR7 257 aa12.33□□□□□ -0.44
NOP56-220ENST00000616692 KLF13Q9Y2Y9 288 aaPredicted RBP12.33□□□□□ -0.44
NOP56-220ENST00000616692 HEATR5BQ9P2D3 2071 aa12.32□□□□□ -0.44
NOP56-220ENST00000616692 SRSF10O75494 262 aaKnown RBP12.32□□□□□ -0.44
NOP56-220ENST00000616692 NUDT14O95848 222 aa12.32□□□□□ -0.44
NOP56-220ENST00000616692 CNTFRP26992 372 aa12.32□□□□□ -0.44
NOP56-220ENST00000616692 C6orf226Q5I0X4 101 aa12.32□□□□□ -0.44
NOP56-220ENST00000616692 A8MWL6 223 aa12.32□□□□□ -0.44
NOP56-220ENST00000616692 UQCRQO14949 82 aa12.32□□□□□ -0.44
NOP56-220ENST00000616692 CIARTQ8N365 385 aaPredicted RBP12.32□□□□□ -0.44
NOP56-220ENST00000616692 PCNX3Q9H6A9 2034 aa12.31□□□□□ -0.44
NOP56-220ENST00000616692 C19orf84I3L1E1 186 aa12.31□□□□□ -0.44
NOP56-220ENST00000616692 NCR2O95944 276 aa12.31□□□□□ -0.44
NOP56-220ENST00000616692 VN1R4Q7Z5H5 301 aa12.31□□□□□ -0.44
NOP56-220ENST00000616692 LINC00526Q96FQ7 95 aa12.31□□□□□ -0.44
NOP56-220ENST00000616692 PSENENQ9NZ42 101 aa12.31□□□□□ -0.44
NOP56-220ENST00000616692 TEP1Q99973 2627 aaKnown RBP12.31□□□□□ -0.44
NOP56-220ENST00000616692 NPIPB6E9PJ23 425 aa12.31□□□□□ -0.44
NOP56-220ENST00000616692 RRHO14718 337 aa12.31□□□□□ -0.44
NOP56-220ENST00000616692 TIRAPP58753 221 aa12.31□□□□□ -0.44
NOP56-220ENST00000616692 HSPE1P61604 102 aaKnown RBP12.31□□□□□ -0.44
NOP56-220ENST00000616692 RNF144BQ7Z419 303 aa12.31□□□□□ -0.44
NOP56-220ENST00000616692 RPS19BP1Q86WX3 136 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms