RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 SCGB3A1Q96QR1 104 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 TMEM213A2RRL7 107 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 SPINK14Q6IE38 97 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 ERG28Q9UKR5 140 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 TRAV2A0A0B4J234 112 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 AGFG2O95081 481 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 TCRAP04437 139 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 PF4V1P10720 104 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 RRN3P1Q2M238 152 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 MOGAT3Q86VF5 341 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 ABHD17AQ96GS6 310 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 WDR87Q6ZQQ6 2873 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 MGST3O14880 152 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 C2orf91Q6ZV80 131 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 JPT1Q9UK76 154 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 CADP27708 2225 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 ZNF56Q15929 161 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 TMEM158Q8WZ71 300 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 CACNA1EQ15878 2313 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 CGB1A6NKQ9 187 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 PMS2P5A8MQ11 134 aa11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 FOXG1P55316 489 aaPredicted RBP11.03□□□□□ -0.64
PPP4R3B-205ENST00000616288 C21orf140B9A014 251 aa11.02□□□□□ -0.64
PPP4R3B-205ENST00000616288 SLC25A53Q5H9E4 307 aa11.02□□□□□ -0.64
PPP4R3B-205ENST00000616288 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.02□□□□□ -0.64
PPP4R3B-205ENST00000616288 OR4C13Q8NGP0 309 aa11.02□□□□□ -0.64
PPP4R3B-205ENST00000616288 IGLV3-1P01715 115 aa11.02□□□□□ -0.65
PPP4R3B-205ENST00000616288 Q6AWC8 147 aa11.02□□□□□ -0.65
PPP4R3B-205ENST00000616288 TRBV6-6A0A0A6YYG2 114 aa11.02□□□□□ -0.65
PPP4R3B-205ENST00000616288 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.02□□□□□ -0.65
PPP4R3B-205ENST00000616288 IGHV4-34P06331 123 aa11.02□□□□□ -0.65
PPP4R3B-205ENST00000616288 RPL32P62910 135 aaKnown RBP11.02□□□□□ -0.65
PPP4R3B-205ENST00000616288 CHCHD2Q9Y6H1 151 aaPredicted RBP11.02□□□□□ -0.65
PPP4R3B-205ENST00000616288 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
PPP4R3B-205ENST00000616288 CACNG8Q8WXS5 425 aa11.01□□□□□ -0.65
PPP4R3B-205ENST00000616288 SLC25A2Q9BXI2 301 aa11.01□□□□□ -0.65
PPP4R3B-205ENST00000616288 PKDREJQ9NTG1 2253 aa11.01□□□□□ -0.65
PPP4R3B-205ENST00000616288 FCN3O75636 299 aa11.01□□□□□ -0.65
PPP4R3B-205ENST00000616288 RPL11P62913 178 aaKnown RBP11.01□□□□□ -0.65
PPP4R3B-205ENST00000616288 MRPS17Q9Y2R5 130 aaKnown RBP11.01□□□□□ -0.65
PPP4R3B-205ENST00000616288 CACNA1BQ00975 2339 aa11.01□□□□□ -0.65
PPP4R3B-205ENST00000616288 FNDC10F2Z333 226 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 GATA3P23771 443 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 Q6P435 159 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 OR13C6PQ8NH95 151 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 FAM159AQ6UWV7 190 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 EDA2RQ9HAV5 297 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 NXT2Q9NPJ8 142 aaKnown RBP11□□□□□ -0.65
PPP4R3B-205ENST00000616288 MED13Q9UHV7 2174 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 NDUFS7O75251 213 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 C5orf64Q2M2E5 130 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 C10orf55Q5SWW7 151 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 TNFRSF6BO95407 300 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 RFPL3SP0C7P2 107 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 ID1P41134 155 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 C15orf53Q8NAA6 179 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 GTSF1Q8WW33 167 aa11□□□□□ -0.65
PPP4R3B-205ENST00000616288 NPIPB11E5RHQ5 1161 aa10.99□□□□□ -0.65
PPP4R3B-205ENST00000616288 CCL7P80098 99 aa10.99□□□□□ -0.65
PPP4R3B-205ENST00000616288 UBALD2Q8IYN6 164 aa10.99□□□□□ -0.65
PPP4R3B-205ENST00000616288 DEFB104AQ8WTQ1 72 aa10.99□□□□□ -0.65
PPP4R3B-205ENST00000616288 SAA2P0DJI9 122 aaPredicted RBP10.99□□□□□ -0.65
PPP4R3B-205ENST00000616288 SMPXQ9UHP9 88 aa10.99□□□□□ -0.65
PPP4R3B-205ENST00000616288 SAA1P0DJI8 122 aaPredicted RBP10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 PRCDQ00LT1 54 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 RPL27AP46776 148 aaKnown RBP10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 GUSBP11Q6P575 273 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 GCSAMQ8N6F7 178 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 SPATA25Q9BR10 227 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 MRPL35Q9NZE8 188 aaKnown RBP10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 S4R3C0 116 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 PRR19A6NJB7 356 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 UPK2O00526 184 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 METRNQ9UJH8 293 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 KMT2EQ8IZD2 1858 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 TRAV12-3A0A0B4J271 114 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 HLA-DRB4P13762 266 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 OTORQ9NRC9 128 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 HLA-DRB4X5D2U9 266 aa10.98□□□□□ -0.65
PPP4R3B-205ENST00000616288 PRR20EP86478 221 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 PRR20CP86479 221 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 PRR20DP86480 221 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 PRR20BP86481 221 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 PRR20AP86496 221 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 FAM214BQ7L5A3 538 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 KLF14Q8TD94 323 aaPredicted RBP10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 NOTCH3Q9UM47 2321 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 M0R1B8 84 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 NTN5Q8WTR8 489 aaPredicted RBP10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 TIMD4Q96H15 378 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 KIR2DL4Q99706 377 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 APC2O95996 2303 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 TANC2Q9HCD6 1990 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 FAM201AQ5SY85 155 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 CCL13Q99616 98 aa10.97□□□□□ -0.65
PPP4R3B-205ENST00000616288 ADAMTS9Q9P2N4 1935 aa10.96□□□□□ -0.65
PPP4R3B-205ENST00000616288 TRGV8A0A0C4DH27 118 aa10.96□□□□□ -0.65
PPP4R3B-205ENST00000616288 IGHV3-35A0A0C4DH35 117 aa10.96□□□□□ -0.65
PPP4R3B-205ENST00000616288 FAM106CPP0CH98 169 aa10.96□□□□□ -0.65
PPP4R3B-205ENST00000616288 XGP55808 180 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms