RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 F8W735 103 aaPredicted RBP9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 EFNA2O43921 213 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 FAM90A26D6RGX4 464 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 RPL23P62829 140 aaKnown RBP9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 FAM90A2PQ658T7 463 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 MRPS18AQ9NVS2 196 aaKnown RBP9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 B9A039 149 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IL17RELQ6ZVW7 336 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 NHSL1Q5SYE7 1610 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IQCF6A8MYZ5 107 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 APOC4P55056 127 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 RNASE13Q5GAN3 156 aaKnown RBP9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 HIGD1CA8MV81 97 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 Q9H3A6 140 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TMEM178BH3BS89 294 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 ZNF146Q15072 292 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 EFNB3Q15768 340 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 CIARTQ8N365 385 aaPredicted RBP9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 DRAM1Q8N682 238 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TIMM21Q9BVV7 248 aa9.01□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGKV1D-16P01601 117 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 MPV17P39210 176 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 RETNLBQ9BQ08 111 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGLV3-9A0A075B6K5 115 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGKV2-40A0A087WW87 121 aaPredicted RBP9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGKV2D-40P01614 121 aaPredicted RBP9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGHV3-30P01768 117 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGHV3-33P01772 117 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGHV3-30-3P0DP02 117 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGHV3-30-5P0DP03 117 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 STPG4Q8N801 248 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 PIN1P1O15428 100 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 SCTP09683 121 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 SLC25A48Q6ZT89 311 aaKnown RBP9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 ZNF275Q9NSD4 429 aaPredicted RBP9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGLV10-54A0A075B6I4 117 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TMEM89A2RUT3 159 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 CGAP01215 116 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 NPSP0C0P6 89 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TEX49A0A1B0GTD5 131 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 SMIM27A0A1W2PRY6 76 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 NBEAP1P0C6P0 100 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 LAGE3Q14657 143 aa9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 MBNL3Q9NUK0 354 aaKnown RBP9□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TRBV25-1A0A075B6N4 114 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 A0A1W2PQF6 199 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 LIFP15018 202 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IL9P15248 144 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 ATP1A1-AS1Q5TC04 95 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 CXorf51AA0A1B0GTR3 108 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 RHOGP84095 191 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 CFHR1Q03591 330 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 FGFRL1Q8N441 504 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 LYPD6BQ8NI32 183 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TMEM243Q9BU79 118 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 ESM1Q9NQ30 184 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TRBV9A0A0B4J1U6 114 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 MYMXA0A1B0GTQ4 84 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 CSTL1Q9H114 145 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TBX6O95947 436 aaPredicted RBP8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 SSBP1Q04837 148 aaKnown RBP8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 CD200R1LQ6Q8B3 271 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 PIP4P2Q8N4L2 257 aa8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGFBP3P17936 291 aaPredicted RBP8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 PUSL1Q8N0Z8 303 aaKnown RBP8.99□□□□□ -0.97
CNTNAP3B-211ENST00000612828 ZG16O60844 167 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 FAM201AQ5SY85 155 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 WFDC10BQ8IUB3 73 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 EFEMP2O95967 443 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 MRPL23Q16540 153 aaKnown RBP8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TSC2P49815 1807 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 CNOT1A5YKK6 2376 aaKnown RBP8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 VSIG8P0DPA2 414 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 PSG3Q16557 428 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 AZU1P20160 251 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TGIF1Q15583 401 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 RPL39P5Q59GN2 51 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 BRD3OSQ6XYD6 125 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 ASCL2Q99929 193 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 LMO7DNF2Z398 122 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 NBR2O15453 112 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IFITM1P13164 125 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TTTY12Q9BZ98 90 aa8.98□□□□□ -0.97
CNTNAP3B-211ENST00000612828 MYLKQ15746 1914 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGHV1-18A0A0C4DH31 117 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 BSPH1Q075Z2 132 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 FABP5P3A8MUU1 101 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 PRR33A8MZF0 331 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 LYNX1G3V0Z9 82 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 LYNX1P0DP58 116 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 CCL3P10147 92 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 ZNF660Q6AZW8 331 aaPredicted RBP8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 SPEM1Q8N4L4 309 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 IGKV1-16P04430 117 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 Q6ZVQ6 151 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 SCO2A0A1W2PP80 73 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 SURF2Q15527 256 aaPredicted RBP8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 PCDH15Q96QU1 1955 aa8.97□□□□□ -0.97
CNTNAP3B-211ENST00000612828 TRBV20-1A0A075B6N2 111 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms