RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 Q8N976 141 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 VN1R17PQ8TDU5 208 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 BLNKQ8WV28 456 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 FMC1Q96HJ9 113 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 RNF114Q9Y508 228 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 LRRK2Q5S007 2527 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 UBR5O95071 2799 aaPredicted RBP11.66□□□□□ -0.54
CDH1-213ENST00000612417 LY6LH3BQJ8 138 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 OR2J3O76001 311 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 TOMM40O96008 361 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 PPBPP02775 128 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 TDRG1Q3Y452 100 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 CT83Q5H943 113 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 C19orf35Q6ZS72 473 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 LY6G5BQ8NDX9 201 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 C18orf32Q8TCD1 76 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 VAMP8Q9BV40 100 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 SPG11Q96JI7 2443 aa11.66□□□□□ -0.54
CDH1-213ENST00000612417 A0A1B0GXF2 115 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 A1L4Q6 167 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 HIGD1CA8MV81 97 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 K7EP13 123 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 LTAP01374 205 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 IGLC1P0CG04 106 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 KLF5Q13887 457 aaPredicted RBP11.65□□□□□ -0.54
CDH1-213ENST00000612417 SRSF12Q8WXF0 261 aaKnown RBP11.65□□□□□ -0.54
CDH1-213ENST00000612417 TMEM190Q8WZ59 177 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 RPEQ96AT9 228 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 MIEN1Q9BRT3 115 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 PRSS22Q9GZN4 317 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 ZNF492Q9P255 531 aa11.65□□□□□ -0.54
CDH1-213ENST00000612417 IGHV4-39P01824 125 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 GDF5OSQ5U4N7 250 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 PRR27Q6MZM9 219 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 OR4B1Q8NGF8 309 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 HIGD1AQ9Y241 93 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 I3L2K1 104 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 TCRAP04437 139 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 APELAP0DMC3 54 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 SRSF1Q07955 248 aaKnown RBP eCLIP11.64□□□□□ -0.55
CDH1-213ENST00000612417 ASPHD1Q5U4P2 390 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 LEMD1Q68G75 181 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 NIT1Q86X76 327 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 FAM103A1Q9BTL3 118 aaKnown RBP11.64□□□□□ -0.55
CDH1-213ENST00000612417 BPESC1Q9GZL8 116 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 Q9H3A6 140 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 FBXL15Q9H469 300 aa11.64□□□□□ -0.55
CDH1-213ENST00000612417 ABCA1O95477 2261 aa11.63□□□□□ -0.55
CDH1-213ENST00000612417 C19orf71A6NCJ1 209 aa11.63□□□□□ -0.55
CDH1-213ENST00000612417 DIRC3C9JPN6 131 aa11.63□□□□□ -0.55
CDH1-213ENST00000612417 COX6B1P14854 86 aa11.63□□□□□ -0.55
CDH1-213ENST00000612417 KRTDAPP60985 99 aa11.63□□□□□ -0.55
CDH1-213ENST00000612417 RPP21Q9H633 154 aaKnown RBP11.63□□□□□ -0.55
CDH1-213ENST00000612417 PAM16Q9Y3D7 125 aa11.63□□□□□ -0.55
CDH1-213ENST00000612417 SOX21Q9Y651 276 aaPredicted RBP11.63□□□□□ -0.55
CDH1-213ENST00000612417 VWC2LB2RUY7 222 aa11.63□□□□□ -0.55
CDH1-213ENST00000612417 PSG1P11464 419 aa11.63□□□□□ -0.55
CDH1-213ENST00000612417 PMCHP20382 165 aa11.63□□□□□ -0.55
CDH1-213ENST00000612417 RNASE8Q8TDE3 154 aaKnown RBP11.63□□□□□ -0.55
CDH1-213ENST00000612417 OTORQ9NRC9 128 aa11.63□□□□□ -0.55
CDH1-213ENST00000612417 IGHV3-21A0A0B4J1V1 117 aa11.62□□□□□ -0.55
CDH1-213ENST00000612417 ZFP36P26651 326 aaKnown RBP11.62□□□□□ -0.55
CDH1-213ENST00000612417 MMDQ15546 238 aa11.62□□□□□ -0.55
CDH1-213ENST00000612417 ALKBH7Q9BT30 221 aaPredicted RBP11.62□□□□□ -0.55
CDH1-213ENST00000612417 SLC25A39Q9BZJ4 359 aaPredicted RBP11.62□□□□□ -0.55
CDH1-213ENST00000612417 GFRA4Q9GZZ7 299 aa11.62□□□□□ -0.55
CDH1-213ENST00000612417 A8MWL6 223 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 TCF21O43680 179 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 HOXB4P17483 251 aaPredicted RBP11.61□□□□□ -0.55
CDH1-213ENST00000612417 CTRLP40313 264 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 LINC00322Q6ZN03 302 aaPredicted RBP11.61□□□□□ -0.55
CDH1-213ENST00000612417 RPH3ALQ9UNE2 315 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 FAM231BA6NCW3 169 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 TMEM238C9JI98 176 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 M0R1W7 72 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 IGKV1-17P01599 117 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 C3orf79P0CE67 100 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 ATP5J2P56134 94 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 LYZP61626 148 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 ZNF705AQ6ZN79 300 aaPredicted RBP11.61□□□□□ -0.55
CDH1-213ENST00000612417 LHFPL4Q7Z7J7 247 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 RASL11BQ9BPW5 248 aa11.61□□□□□ -0.55
CDH1-213ENST00000612417 TRBV6-1A0A0K0K1D8 114 aa11.6□□□□□ -0.55
CDH1-213ENST00000612417 NPIPB6E9PJ23 425 aa11.6□□□□□ -0.55
CDH1-213ENST00000612417 P01737 135 aa11.6□□□□□ -0.55
CDH1-213ENST00000612417 HBBP68871 147 aa11.6□□□□□ -0.55
CDH1-213ENST00000612417 OR11H6Q8NGC7 330 aa11.6□□□□□ -0.55
CDH1-213ENST00000612417 IGFBPL1Q8WX77 278 aa11.6□□□□□ -0.55
CDH1-213ENST00000612417 SGK494Q96LW2 274 aa11.6□□□□□ -0.55
CDH1-213ENST00000612417 WNT10AQ9GZT5 417 aa11.6□□□□□ -0.55
CDH1-213ENST00000612417 CHD6Q8TD26 2715 aa11.6□□□□□ -0.55
CDH1-213ENST00000612417 CENPEQ02224 2701 aa11.6□□□□□ -0.55
CDH1-213ENST00000612417 K7EIM0 57 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 KLRD1Q13241 179 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 PLGLAQ15195 96 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 LDLRAD2Q5SZI1 272 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 Q86TA4 180 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 ZFP30Q9Y2G7 519 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 MAP1AP78559 2803 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms