RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 NBPF19A0A087WUL8 3843 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 M0R2Z0 102 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 TMPRSS2O15393 492 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 CA1P00915 261 aaPredicted RBP8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 APELAP0DMC3 54 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 VDAC2P45880 294 aaPredicted RBP8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 PSG5Q15238 335 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 TTC9CQ8N5M4 171 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 OR10G8Q8NGN5 311 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 JMJD8Q96S16 334 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 SPAG8Q99932 426 aaPredicted RBP8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 TM2D2Q9BX73 214 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 RNASE7Q9H1E1 156 aaKnown RBP8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 ST20Q9HBF5 79 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 CENPVL3A0A0U1RRI6 287 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 A0A1W2PRX2 142 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 C9orf118A6NHY6 69 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 NTF3P20783 257 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 CRYBB3P26998 211 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 GCHFRP30047 84 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 RPL15P61313 204 aaKnown RBP8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 RBPMS2Q6ZRY4 209 aaKnown RBP8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 KCNIP2Q9NS61 270 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 PROCRQ9UNN8 238 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 SLC25A15Q9Y619 301 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 SRRM5B3KS81 715 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 SGK494Q96LW2 274 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 PSMG3-AS1Q96PY0 264 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 DYSFO75923 2080 aa8.66□□□□□ -1.02
PCDHGC3-202ENST00000611950 CRYBG3Q68DQ2 2970 aa8.65□□□□□ -1.02
PCDHGC3-202ENST00000611950 MGST3O14880 152 aa8.65□□□□□ -1.02
PCDHGC3-202ENST00000611950 CXorf1O96002 111 aa8.65□□□□□ -1.02
PCDHGC3-202ENST00000611950 MGST1P10620 155 aaKnown RBP8.65□□□□□ -1.02
PCDHGC3-202ENST00000611950 CCL8P80075 99 aa8.65□□□□□ -1.02
PCDHGC3-202ENST00000611950 TEPPQ6URK8 271 aa8.65□□□□□ -1.02
PCDHGC3-202ENST00000611950 WNT10AQ9GZT5 417 aa8.65□□□□□ -1.02
PCDHGC3-202ENST00000611950 DSCAML1Q8TD84 2053 aa8.65□□□□□ -1.02
PCDHGC3-202ENST00000611950 SNURFLB1AK76 121 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 FCN1O00602 326 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 ZNF253O75346 499 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 SERF1AO75920 110 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 PLAUP00749 431 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 MT-ATP8P03928 68 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 CT45A10P0DMU9 189 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 OPRK1P41145 380 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 MRPL54Q6P161 138 aaKnown RBP8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 PQLC2Q6ZP29 291 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 OR9G1Q8NH87 305 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 C8orf46Q8TAG6 207 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 LINC00479Q96M42 142 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 AP1S3Q96PC3 154 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 TMEM126AQ9H061 195 aa8.65□□□□□ -1.03
PCDHGC3-202ENST00000611950 IGKV1OR2-108A0A075B7D4 117 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 DPRXA6NFQ7 191 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 FAM90A27PA6NNH2 459 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 SRRM4A7MD48 611 aaKnown RBP8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 PRSS46E5RG02 174 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 RPL7P18124 248 aaKnown RBP8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 TCTAP57738 103 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 BAGE3Q86Y29 109 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 BAGE2Q86Y30 109 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 FAM90A1Q86YD7 464 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 MRPL18Q9H0U6 180 aaKnown RBP8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 RAI1Q7Z5J4 1906 aaPredicted RBP8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 TRAV5A0A0B4J249 113 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 J3QLI3 93 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 DLX1P56177 255 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 KLRB1Q12918 225 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 C17orf58Q2M2W7 97 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 SSBP3Q9BWW4 388 aaPredicted RBP8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 SAMD10Q9BYL1 202 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 SPANXB1Q9NS25 103 aaPredicted RBP8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 AKAP6Q13023 2319 aa8.64□□□□□ -1.03
PCDHGC3-202ENST00000611950 C15orf61A6NNL5 157 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 LINC00869P0C866 280 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 FAM27E3Q08E93 113 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 CENPWQ5EE01 88 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 C10orf55Q5SWW7 151 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 MORN5Q5VZ52 161 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 SIGLECL1Q8N7X8 197 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 IDI2-AS1Q9NZ38 188 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 HIVEP3Q5T1R4 2406 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 TRAV9-2A0A087WT02 112 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 MBD3L4A6NDZ8 208 aaPredicted RBP8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 MBD3L3A6NE82 208 aaPredicted RBP8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 MBD3L5A6NJ08 208 aaPredicted RBP8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 K7EM74 188 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 CRISP2P16562 243 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 LGALS4P56470 323 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 ANXA2RQ3ZCQ2 193 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 ADAMTSL5Q6ZMM2 481 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 FAM19A5Q7Z5A7 132 aaPredicted RBP8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 MBD3L2Q8NHZ7 208 aaPredicted RBP8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 SIRPDQ9H106 197 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 LINC00312Q9Y6C7 94 aa8.63□□□□□ -1.03
PCDHGC3-202ENST00000611950 IGHV3-21A0A0B4J1V1 117 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 hADV38S2A0JD32 116 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 GPX1P07203 203 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 CCL3L1P16619 93 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms