RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 MAP1LC3CQ9BXW4 147 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 IGHV3-49A0A0A0MS15 119 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 KIR2DL5BA0A0G2JN68 375 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 KIR2DL5BA0A0G2JPC4 375 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 ZNF124Q15973 351 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 OR10J3Q5JRS4 329 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 KIR2DL5AQ8N109 375 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 A0A1B0GW15 77 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 SIAH2O43255 324 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 TOMM40O96008 361 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 IGHV3-23P01764 117 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 C3orf79P0CE67 100 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 ESDP10768 282 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 ATP5J2P56134 94 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 RHOGP84095 191 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 SCGB2A2Q13296 93 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 RASL11AQ6T310 242 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 CLEC2AQ6UVW9 174 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 Q86TA4 180 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 TMEM190Q8WZ59 177 aa5.1□□□□□ -1.59
SNX13-213ENST00000611725 IGKV3-7A0A075B6H7 116 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 CKS2P33552 79 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 MINOS1Q5TGZ0 78 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 C18orf32Q8TCD1 76 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 FXYD5Q96DB9 178 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 SRSF8Q9BRL6 282 aaKnown RBP5.09□□□□□ -1.59
SNX13-213ENST00000611725 MINOS1-NBL1R4GNA1 71 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 ADAMTS9Q9P2N4 1935 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 OR2T8A6NH00 312 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 PRSS1P07477 247 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 RPS20P60866 119 aaKnown RBP5.09□□□□□ -1.59
SNX13-213ENST00000611725 NUTF2P61970 127 aaKnown RBP5.09□□□□□ -1.59
SNX13-213ENST00000611725 PLXNB1O43157 2135 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 WDFY4Q6ZS81 3184 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 OR4C46A6NHA9 309 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 RPLP1P05386 114 aaKnown RBP5.09□□□□□ -1.59
SNX13-213ENST00000611725 ARL3P36405 182 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 MRPL27Q9P0M9 148 aaKnown RBP5.09□□□□□ -1.59
SNX13-213ENST00000611725 IGHV3OR16-10A0A075B7F0 116 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 MUC21A0A0G2JKD1 596 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 MUC21A0A140T8X8 626 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 FBLL1A6NHQ2 334 aaKnown RBP5.09□□□□□ -1.59
SNX13-213ENST00000611725 PRB4P10163 310 aaPredicted RBP5.09□□□□□ -1.59
SNX13-213ENST00000611725 PF4V1P10720 104 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 C15orf32Q32M92 178 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 MUC21Q5SSG8 566 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 METTL26Q96S19 204 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 SLC25A2Q9BXI2 301 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 HSPB8Q9UJY1 196 aa5.09□□□□□ -1.59
SNX13-213ENST00000611725 FAM231BA6NCW3 169 aa5.09□□□□□ -1.6
SNX13-213ENST00000611725 RNF224P0DH78 156 aa5.09□□□□□ -1.6
SNX13-213ENST00000611725 CT83Q5H943 113 aa5.09□□□□□ -1.6
SNX13-213ENST00000611725 SLC25A34Q6PIV7 304 aa5.09□□□□□ -1.6
SNX13-213ENST00000611725 OR10AG1Q8NH19 301 aa5.09□□□□□ -1.6
SNX13-213ENST00000611725 UFC1Q9Y3C8 167 aa5.09□□□□□ -1.6
SNX13-213ENST00000611725 CDH23Q9H251 3354 aa5.09□□□□□ -1.6
SNX13-213ENST00000611725 TRBV19A0A075B6N1 114 aa5.09□□□□□ -1.6
SNX13-213ENST00000611725 HINT1P49773 126 aaPredicted RBP5.09□□□□□ -1.6
SNX13-213ENST00000611725 SSBP2P81877 361 aaPredicted RBP5.09□□□□□ -1.6
SNX13-213ENST00000611725 LYPD1Q8N2G4 141 aa5.09□□□□□ -1.6
SNX13-213ENST00000611725 ZNF503Q96F45 646 aa5.09□□□□□ -1.6
SNX13-213ENST00000611725 SNHG12Q9BXW3 62 aa5.09□□□□□ -1.6
SNX13-213ENST00000611725 LCN12Q6JVE5 192 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 SMIM12Q96EX1 92 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 SLAQ13239 276 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 Q6ZWC4 215 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 C11orf42Q8N5U0 333 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 OR8A1Q8NGG7 326 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 FAM168AQ92567 244 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 NUPR1O60356 82 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 NDUFS7O75251 213 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 IGLV2-23P01705 113 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 BTF3P20290 206 aaKnown RBP5.08□□□□□ -1.6
SNX13-213ENST00000611725 FBXL19-AS1Q494R0 122 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 JKAMPQ9P055 326 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 EREGO14944 169 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 FRMD6-AS1P0C7T7 363 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 SPANXN1Q5VSR9 72 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 PRELID3AQ96N28 172 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 ZNF492Q9P255 531 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 GOLT1BQ9Y3E0 138 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 TRAV9-2A0A087WT02 112 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 M0QZ24 198 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 APOHP02749 345 aaPredicted RBP5.08□□□□□ -1.6
SNX13-213ENST00000611725 EEF1AKMT3Q96AZ1 226 aa5.08□□□□□ -1.6
SNX13-213ENST00000611725 CGB1A6NKQ9 187 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 J3KRW8 73 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 ZNF207O43670 478 aaKnown RBP5.07□□□□□ -1.6
SNX13-213ENST00000611725 PLP1P60201 277 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 PDE6HQ13956 83 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 CLEC19AQ6UXS0 136 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 ZNF491Q8N8L2 437 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 BPESC1Q9GZL8 116 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 LAMTOR2Q9Y2Q5 125 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 POLR3KQ9Y2Y1 108 aaPredicted RBP5.07□□□□□ -1.6
SNX13-213ENST00000611725 NDUFB8O95169 186 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 TRGV3P03979 118 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 DMRTC2Q8IXT2 367 aaPredicted RBP5.07□□□□□ -1.6
SNX13-213ENST00000611725 ATP5G2Q06055 141 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 LY6EQ16553 131 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms