RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 K7ENP7 123 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 PSMG4Q5JS54 123 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 FNDC10F2Z333 226 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 Q8TAT8 98 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 TMEM101Q96IK0 257 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 JKAMPQ9P055 326 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 EMP1P54849 157 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 ACTL10Q5JWF8 245 aa11.57□□□□□ -0.56
PCDHB16-201ENST00000609684 KIAA1671Q9BY89 1806 aa11.56□□□□□ -0.56
PCDHB16-201ENST00000609684 TRGV2A0A075B6R0 118 aa11.56□□□□□ -0.56
PCDHB16-201ENST00000609684 PRTN3P24158 256 aa11.56□□□□□ -0.56
PCDHB16-201ENST00000609684 NDPQ00604 133 aa11.56□□□□□ -0.56
PCDHB16-201ENST00000609684 TMEM155Q4W5P6 130 aa11.56□□□□□ -0.56
PCDHB16-201ENST00000609684 C2orf88Q9BSF0 95 aa11.56□□□□□ -0.56
PCDHB16-201ENST00000609684 SRSF1Q07955 248 aaKnown RBP eCLIP11.56□□□□□ -0.56
PCDHB16-201ENST00000609684 B4DSR2 109 aa11.56□□□□□ -0.56
PCDHB16-201ENST00000609684 NCR2O95944 276 aa11.56□□□□□ -0.56
PCDHB16-201ENST00000609684 DSCR9P59020 149 aa11.56□□□□□ -0.56
PCDHB16-201ENST00000609684 NUP35Q8NFH5 326 aa11.56□□□□□ -0.56
PCDHB16-201ENST00000609684 GTF3C1Q12789 2109 aa11.55□□□□□ -0.56
PCDHB16-201ENST00000609684 TMEM14BQ9NUH8 114 aa11.55□□□□□ -0.56
PCDHB16-201ENST00000609684 CEACAM8P31997 349 aaPredicted RBP11.55□□□□□ -0.56
PCDHB16-201ENST00000609684 IGFL4Q6B9Z1 124 aa11.55□□□□□ -0.56
PCDHB16-201ENST00000609684 LYZL1Q6UWQ5 148 aa11.55□□□□□ -0.56
PCDHB16-201ENST00000609684 STHQ8IWL8 128 aa11.55□□□□□ -0.56
PCDHB16-201ENST00000609684 Q8TCH9 128 aa11.55□□□□□ -0.56
PCDHB16-201ENST00000609684 LINC00479Q96M42 142 aa11.55□□□□□ -0.56
PCDHB16-201ENST00000609684 IFI27L1Q96BM0 104 aa11.55□□□□□ -0.56
PCDHB16-201ENST00000609684 NUP210Q8TEM1 1887 aaPredicted RBP11.55□□□□□ -0.56
PCDHB16-201ENST00000609684 APOMO95445 188 aa11.54□□□□□ -0.56
PCDHB16-201ENST00000609684 SAA4P35542 130 aa11.54□□□□□ -0.56
PCDHB16-201ENST00000609684 DMRTA1Q5VZB9 504 aa11.54□□□□□ -0.56
PCDHB16-201ENST00000609684 TMEM190Q8WZ59 177 aa11.54□□□□□ -0.56
PCDHB16-201ENST00000609684 D6R8Y8 96 aa11.54□□□□□ -0.56
PCDHB16-201ENST00000609684 IGLV1-44P01699 117 aa11.54□□□□□ -0.56
PCDHB16-201ENST00000609684 C17orf58Q2M2W7 97 aa11.54□□□□□ -0.56
PCDHB16-201ENST00000609684 CYSLTR1Q9Y271 337 aa11.54□□□□□ -0.56
PCDHB16-201ENST00000609684 DOCK11Q5JSL3 2073 aa11.54□□□□□ -0.56
PCDHB16-201ENST00000609684 RASL11AQ6T310 242 aa11.54□□□□□ -0.56
PCDHB16-201ENST00000609684 DPM2O94777 84 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 TOMM40O96008 361 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 C3orf36Q3SXR2 165 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 CYB5R2Q6BCY4 276 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 ZNF329Q86UD4 541 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 FAM215AQ9Y5M1 114 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 IFI27P40305 119 aaPredicted RBP11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 ZNF138P52744 262 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 PSG3Q16557 428 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 ORMDL2Q53FV1 153 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 TRBV7-1A0A0A6YYK4 115 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 JMJD8Q96S16 334 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 ALKBH7Q9BT30 221 aaPredicted RBP11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 VCX2Q9H322 139 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 SH2D1AO60880 128 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 CNTFRP26992 372 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 PYY3Q5JQD4 70 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 OR13C6PQ8NH95 151 aa11.53□□□□□ -0.56
PCDHB16-201ENST00000609684 H3BRM9 83 aa11.52□□□□□ -0.56
PCDHB16-201ENST00000609684 RNASE1P07998 156 aaKnown RBP11.52□□□□□ -0.56
PCDHB16-201ENST00000609684 LCN12Q6JVE5 192 aa11.52□□□□□ -0.56
PCDHB16-201ENST00000609684 C9orf139Q6ZV77 190 aa11.52□□□□□ -0.56
PCDHB16-201ENST00000609684 BEND2Q8NDZ0 799 aa11.52□□□□□ -0.56
PCDHB16-201ENST00000609684 TOMM7Q9P0U1 55 aa11.52□□□□□ -0.56
PCDHB16-201ENST00000609684 ZNF688P0C7X2 276 aa11.52□□□□□ -0.57
PCDHB16-201ENST00000609684 NDUFA4L2Q9NRX3 87 aa11.52□□□□□ -0.57
PCDHB16-201ENST00000609684 SPCS1Q9Y6A9 102 aa11.52□□□□□ -0.57
PCDHB16-201ENST00000609684 LOXP28300 417 aaPredicted RBP11.52□□□□□ -0.57
PCDHB16-201ENST00000609684 LYPD1Q8N2G4 141 aa11.52□□□□□ -0.57
PCDHB16-201ENST00000609684 C15orf65H3BRN8 121 aa11.51□□□□□ -0.57
PCDHB16-201ENST00000609684 NCOR1P1Q9H4R4 102 aa11.51□□□□□ -0.57
PCDHB16-201ENST00000609684 MALRD1Q5VYJ5 2156 aa11.51□□□□□ -0.57
PCDHB16-201ENST00000609684 H3BUT2 72 aa11.51□□□□□ -0.57
PCDHB16-201ENST00000609684 TRGV11A0A075B6L2 103 aa11.51□□□□□ -0.57
PCDHB16-201ENST00000609684 SRRM4A7MD48 611 aaKnown RBP11.51□□□□□ -0.57
PCDHB16-201ENST00000609684 ZNF833PQ6ZTB9 187 aa11.51□□□□□ -0.57
PCDHB16-201ENST00000609684 SHANK2-AS3Q9BTD1 123 aa11.51□□□□□ -0.57
PCDHB16-201ENST00000609684 ZNF726P1Q15940 193 aa11.51□□□□□ -0.57
PCDHB16-201ENST00000609684 SRSF8Q9BRL6 282 aaKnown RBP11.51□□□□□ -0.57
PCDHB16-201ENST00000609684 ZGRF1Q86YA3 2104 aa11.51□□□□□ -0.57
PCDHB16-201ENST00000609684 IGLV3-9A0A075B6K5 115 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 ZNF134P52741 427 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 ZNF562Q6V9R5 426 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 Q86TA4 180 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 PLXNB3Q9ULL4 1909 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 MMP23AO75900 390 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 NHP2Q9NX24 153 aaKnown RBP11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 DMRTC2Q8IXT2 367 aaPredicted RBP11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 IGKV3D-20A0A0C4DH25 116 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 DKK1O94907 266 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 IGKCP01834 107 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 HTN3P15516 51 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 CFHR2P36980 270 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 RNF138Q8WVD3 245 aa11.5□□□□□ -0.57
PCDHB16-201ENST00000609684 FXYD7P58549 80 aa11.49□□□□□ -0.57
PCDHB16-201ENST00000609684 A0A1B0GWB2 263 aa11.49□□□□□ -0.57
PCDHB16-201ENST00000609684 DNAL4O96015 105 aa11.49□□□□□ -0.57
PCDHB16-201ENST00000609684 CHTOPQ9Y3Y2 248 aaKnown RBP11.49□□□□□ -0.57
PCDHB16-201ENST00000609684 FCN3O75636 299 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms