RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 TMEM158Q8WZ71 300 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 SAP30O75446 220 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 SLC25A48Q6ZT89 311 aaKnown RBP10.75□□□□□ -0.69
USP6NL-205ENST00000609104 TRAV3A0A0B4J244 114 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 TRAV41A0A0B4J266 112 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 LINC01551Q86U37 167 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 GLRX5Q86SX6 157 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 PCNX2A6NKB5 2137 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 CSRP2Q16527 193 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 C6orf226Q5I0X4 101 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 VCYO14598 125 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 FOXF2Q12947 444 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 GAGE12BA1L429 117 aa10.75□□□□□ -0.69
USP6NL-205ENST00000609104 FNDC1Q4ZHG4 1894 aaPredicted RBP10.75□□□□□ -0.69
USP6NL-205ENST00000609104 SELLP14151 372 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 Q8TAT8 98 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 SIPA1L1O43166 1804 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 IGKV1-12A0A0C4DH73 117 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 VWC2LB2RUY7 222 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 IGKV1D-12P01611 117 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 TICRRQ7Z2Z1 1910 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 SSC4DQ8WTU2 575 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 METRNQ9UJH8 293 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 MRPL14Q6P1L8 145 aaKnown RBP10.74□□□□□ -0.69
USP6NL-205ENST00000609104 COL4A5P29400 1685 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 SPXQ9BT56 116 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 UBE2V1Q13404 147 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 SRSF7Q16629 238 aaKnown RBP eCLIP10.74□□□□□ -0.69
USP6NL-205ENST00000609104 SHANK1Q9Y566 2161 aa10.74□□□□□ -0.69
USP6NL-205ENST00000609104 LINC01549A6NIU2 74 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 SPINK8P0C7L1 97 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 GAGE2AQ6NT46 116 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 RASL10AQ92737 203 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 MPV17L2Q567V2 206 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 C5orf24Q7Z6I8 188 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 MPZP25189 248 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 TRBV7-1A0A0A6YYK4 115 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 PSCAO43653 123 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 MAJINQ3KP22 176 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 IGFL4Q6B9Z1 124 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 COL6A6A6NMZ7 2263 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 C14orf178Q8N769 122 aaPredicted RBP10.73□□□□□ -0.69
USP6NL-205ENST00000609104 UBE2E2Q96LR5 201 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 CYTL1Q9NRR1 136 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 FBLN5Q9UBX5 448 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 RPL36AP83881 106 aaKnown RBP10.73□□□□□ -0.69
USP6NL-205ENST00000609104 RPL36ALQ969Q0 106 aaKnown RBP10.73□□□□□ -0.69
USP6NL-205ENST00000609104 TRGV9Q99603 122 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 IGHV1-3A0A0C4DH29 117 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 C9JAW5 83 aa10.73□□□□□ -0.69
USP6NL-205ENST00000609104 SUPT4H1P63272 117 aaKnown RBP10.73□□□□□ -0.69
USP6NL-205ENST00000609104 TANC2Q9HCD6 1990 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 C3orf79P0CE67 100 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 NTF4P34130 210 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 TNFRSF14Q92956 283 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 TNS1Q9HBL0 1735 aaKnown RBP10.72□□□□□ -0.69
USP6NL-205ENST00000609104 KLF17Q5JT82 389 aaPredicted RBP10.72□□□□□ -0.69
USP6NL-205ENST00000609104 LILRA1O75019 489 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.72□□□□□ -0.692e-6■■■■□ 22.2
USP6NL-205ENST00000609104 IGKV1-27A0A075B6S5 117 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 LYPD3O95274 346 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 DNAJC30Q96LL9 226 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 ADAMTSL5Q6ZMM2 481 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 C1orf159Q96HA4 380 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 DTX1Q86Y01 620 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 A0A087WWL8 130 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 SUMO4Q6EEV6 95 aa10.72□□□□□ -0.69
USP6NL-205ENST00000609104 ZNF672Q499Z4 452 aaPredicted RBP10.71□□□□□ -0.69
USP6NL-205ENST00000609104 AMN1Q8IY45 258 aa10.71□□□□□ -0.69
USP6NL-205ENST00000609104 RPP25LQ8N5L8 163 aaKnown RBP10.71□□□□□ -0.69
USP6NL-205ENST00000609104 LINC00477Q96M19 166 aa10.71□□□□□ -0.69
USP6NL-205ENST00000609104 TRAV13-1A0A0B4J241 112 aa10.71□□□□□ -0.69
USP6NL-205ENST00000609104 LINC00205P59089 165 aa10.71□□□□□ -0.69
USP6NL-205ENST00000609104 IGHV1-8P0DP01 117 aa10.71□□□□□ -0.69
USP6NL-205ENST00000609104 A0A1B0GW64 132 aa10.71□□□□□ -0.69
USP6NL-205ENST00000609104 LY6DQ14210 128 aa10.71□□□□□ -0.7
USP6NL-205ENST00000609104 KLF12Q9Y4X4 402 aa10.71□□□□□ -0.7
USP6NL-205ENST00000609104 PSPNO60542 156 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 ZNF883P0CG24 379 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 A0A1B0GWJ7 208 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 ZNF664Q8N3J9 261 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 OVOL2Q9BRP0 275 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 LTBP4Q8N2S1 1624 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
USP6NL-205ENST00000609104 TIMM21Q9BVV7 248 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 REG4Q9BYZ8 158 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 THSD7AQ9UPZ6 1657 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 IGLV3-12A0A075B6K2 115 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 TMEM178BH3BS89 294 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 ZSWIM8A7E2V4 1837 aa10.7□□□□□ -0.7
USP6NL-205ENST00000609104 DEFB121Q5J5C9 76 aa10.69□□□□□ -0.7
USP6NL-205ENST00000609104 PCNX1Q96RV3 2341 aa10.69□□□□□ -0.7
USP6NL-205ENST00000609104 LHFPL1Q86WI0 220 aa10.69□□□□□ -0.7
USP6NL-205ENST00000609104 STPG4Q8N801 248 aa10.69□□□□□ -0.7
USP6NL-205ENST00000609104 TRAV1-1A0A0B4J248 108 aa10.69□□□□□ -0.7
USP6NL-205ENST00000609104 FOXG1P55316 489 aaPredicted RBP10.69□□□□□ -0.7
USP6NL-205ENST00000609104 PYY3Q5JQD4 70 aa10.69□□□□□ -0.7
USP6NL-205ENST00000609104 PRIMA1Q86XR5 153 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms