RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 IGHV3OR16-8A0A075B7F1 116 aa16.64■□□□□ 0.25
USP6NL-204ENST00000606752 FAM181BA6NEQ2 426 aa16.64■□□□□ 0.25
USP6NL-204ENST00000606752 CLDN34H7C241 214 aa16.64■□□□□ 0.25
USP6NL-204ENST00000606752 MRPS12O15235 138 aaKnown RBP16.64■□□□□ 0.25
USP6NL-204ENST00000606752 ELANEP08246 267 aa16.64■□□□□ 0.25
USP6NL-204ENST00000606752 MYCNOSP40205 109 aa16.64■□□□□ 0.25
USP6NL-204ENST00000606752 FOXE3Q13461 319 aa16.64■□□□□ 0.25
USP6NL-204ENST00000606752 FAM209BQ5JX69 171 aa16.64■□□□□ 0.25
USP6NL-204ENST00000606752 ESM1Q9NQ30 184 aa16.64■□□□□ 0.25
USP6NL-204ENST00000606752 SERTAD4Q9NUC0 356 aa16.64■□□□□ 0.25
USP6NL-204ENST00000606752 CLPSL1A2RUU4 121 aa16.63■□□□□ 0.25
USP6NL-204ENST00000606752 B4DEV8 164 aa16.63■□□□□ 0.25
USP6NL-204ENST00000606752 IGLC2P0DOY2 106 aa16.63■□□□□ 0.25
USP6NL-204ENST00000606752 AKR1C3P42330 323 aa16.63■□□□□ 0.25
USP6NL-204ENST00000606752 TMEM88Q6PEY1 159 aa16.63■□□□□ 0.25
USP6NL-204ENST00000606752 SRD5A1P18405 259 aa16.63■□□□□ 0.25
USP6NL-204ENST00000606752 TCEAL7Q9BRU2 100 aa16.63■□□□□ 0.25
USP6NL-204ENST00000606752 CDC42EP3Q9UKI2 254 aa16.63■□□□□ 0.25
USP6NL-204ENST00000606752 H3BTX0 84 aa16.62■□□□□ 0.25
USP6NL-204ENST00000606752 NDUFA4O00483 81 aa16.62■□□□□ 0.25
USP6NL-204ENST00000606752 RPL7P18124 248 aaKnown RBP16.62■□□□□ 0.25
USP6NL-204ENST00000606752 TRBV19A0A075B6N1 114 aa16.61■□□□□ 0.25
USP6NL-204ENST00000606752 PGPA6NDG6 321 aa16.61■□□□□ 0.25
USP6NL-204ENST00000606752 RPL23P62829 140 aaKnown RBP16.61■□□□□ 0.25
USP6NL-204ENST00000606752 CBLN2Q8IUK8 224 aa16.61■□□□□ 0.25
USP6NL-204ENST00000606752 OR8I2Q8N0Y5 310 aa16.61■□□□□ 0.25
USP6NL-204ENST00000606752 C2CD4CQ8TF44 421 aa16.61■□□□□ 0.25
USP6NL-204ENST00000606752 METTL26Q96S19 204 aa16.61■□□□□ 0.25
USP6NL-204ENST00000606752 PEF1Q9UBV8 284 aaKnown RBP16.61■□□□□ 0.25
USP6NL-204ENST00000606752 BUB3O43684 328 aa16.61■□□□□ 0.25
USP6NL-204ENST00000606752 GGCTO75223 188 aaKnown RBP16.61■□□□□ 0.25
USP6NL-204ENST00000606752 RPLP1P05386 114 aaKnown RBP16.61■□□□□ 0.25
USP6NL-204ENST00000606752 RNF152Q8N8N0 203 aa16.61■□□□□ 0.25
USP6NL-204ENST00000606752 Q9H3A6 140 aa16.61■□□□□ 0.25
USP6NL-204ENST00000606752 SMCO4Q9NRQ5 59 aa16.61■□□□□ 0.25
USP6NL-204ENST00000606752 ANK3Q12955 4377 aaKnown RBP16.61■□□□□ 0.25
USP6NL-204ENST00000606752 HIVEP2P31629 2446 aa16.6■□□□□ 0.25
USP6NL-204ENST00000606752 A0A087WWC5 75 aa16.6■□□□□ 0.25
USP6NL-204ENST00000606752 HELTA6NFD8 242 aa16.6■□□□□ 0.25
USP6NL-204ENST00000606752 RPL35P42766 123 aaKnown RBP16.6■□□□□ 0.25
USP6NL-204ENST00000606752 RPL15P61313 204 aaKnown RBP16.6■□□□□ 0.25
USP6NL-204ENST00000606752 ADIRFQ15847 76 aa16.6■□□□□ 0.25
USP6NL-204ENST00000606752 Q6ZSV7 163 aa16.6■□□□□ 0.25
USP6NL-204ENST00000606752 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.6■□□□□ 0.25
USP6NL-204ENST00000606752 MYOZ3Q8TDC0 251 aa16.6■□□□□ 0.25
USP6NL-204ENST00000606752 ZNF418Q8TF45 676 aaPredicted RBP16.6■□□□□ 0.25
USP6NL-204ENST00000606752 OTOGQ6ZRI0 2925 aa16.6■□□□□ 0.25
USP6NL-204ENST00000606752 LYPD1Q8N2G4 141 aa16.59■□□□□ 0.25
USP6NL-204ENST00000606752 HIST1H2BAQ96A08 127 aa16.59■□□□□ 0.25
USP6NL-204ENST00000606752 C17orf77Q96MU5 243 aa16.59■□□□□ 0.25
USP6NL-204ENST00000606752 OTORQ9NRC9 128 aa16.59■□□□□ 0.25
USP6NL-204ENST00000606752 EPDR1Q9UM22 224 aa16.59■□□□□ 0.25
USP6NL-204ENST00000606752 TRBV20OR9-2A0A075B6H5 130 aa16.59■□□□□ 0.25
USP6NL-204ENST00000606752 SLC25A5P05141 298 aaKnown RBP16.59■□□□□ 0.25
USP6NL-204ENST00000606752 PDE6HQ13956 83 aa16.59■□□□□ 0.25
USP6NL-204ENST00000606752 C1orf194Q5T5A4 169 aa16.59■□□□□ 0.25
USP6NL-204ENST00000606752 U3KQE9 123 aa16.59■□□□□ 0.25
USP6NL-204ENST00000606752 C9JCJ5 164 aa16.58■□□□□ 0.24
USP6NL-204ENST00000606752 FOSL1P15407 271 aa16.58■□□□□ 0.24
USP6NL-204ENST00000606752 C5orf17Q8NAS9 161 aa16.58■□□□□ 0.24
USP6NL-204ENST00000606752 TMEM190Q8WZ59 177 aa16.58■□□□□ 0.24
USP6NL-204ENST00000606752 GPR82Q96P67 336 aa16.58■□□□□ 0.24
USP6NL-204ENST00000606752 OR5B12Q96R08 314 aa16.58■□□□□ 0.24
USP6NL-204ENST00000606752 PEX7O00628 323 aa16.57■□□□□ 0.24
USP6NL-204ENST00000606752 RNASE1P07998 156 aaKnown RBP16.57■□□□□ 0.24
USP6NL-204ENST00000606752 CD99P14209 185 aa16.57■□□□□ 0.24
USP6NL-204ENST00000606752 UNQ9165/PRO28630Q6UXU0 137 aa16.57■□□□□ 0.24
USP6NL-204ENST00000606752 LINC01551Q86U37 167 aa16.57■□□□□ 0.24
USP6NL-204ENST00000606752 UBE2E2Q96LR5 201 aa16.57■□□□□ 0.24
USP6NL-204ENST00000606752 TUBA4BQ9H853 241 aa16.57■□□□□ 0.24
USP6NL-204ENST00000606752 ZNF207O43670 478 aaKnown RBP16.56■□□□□ 0.24
USP6NL-204ENST00000606752 CRYBA1P05813 215 aa16.56■□□□□ 0.24
USP6NL-204ENST00000606752 KLHDC1Q8N7A1 406 aa16.56■□□□□ 0.24
USP6NL-204ENST00000606752 SMAD5-AS1Q9Y6J3 95 aa16.56■□□□□ 0.24
USP6NL-204ENST00000606752 TSPAN4O14817 238 aa16.56■□□□□ 0.24
USP6NL-204ENST00000606752 APOHP02749 345 aaPredicted RBP16.56■□□□□ 0.24
USP6NL-204ENST00000606752 HILS1P60008 231 aa16.56■□□□□ 0.24
USP6NL-204ENST00000606752 SIGLEC15Q6ZMC9 328 aa16.56■□□□□ 0.24
USP6NL-204ENST00000606752 PRELID1Q9Y255 219 aa16.56■□□□□ 0.24
USP6NL-204ENST00000606752 LY96Q9Y6Y9 160 aa16.56■□□□□ 0.24
USP6NL-204ENST00000606752 MTORP42345 2549 aa16.56■□□□□ 0.24
USP6NL-204ENST00000606752 CNN1P51911 297 aaKnown RBP16.55■□□□□ 0.24
USP6NL-204ENST00000606752 TAS2R60P59551 318 aa16.55■□□□□ 0.24
USP6NL-204ENST00000606752 GNG5P63218 68 aa16.55■□□□□ 0.24
USP6NL-204ENST00000606752 EXOC3-AS1Q8N2X6 119 aa16.55■□□□□ 0.24
USP6NL-204ENST00000606752 OCC1Q8TAD7 63 aa16.55■□□□□ 0.24
USP6NL-204ENST00000606752 PGPEP1LA6NFU8 196 aa16.54■□□□□ 0.24
USP6NL-204ENST00000606752 SLC17A3O00476 420 aa16.54■□□□□ 0.24
USP6NL-204ENST00000606752 MT-ND4LP03901 98 aa16.54■□□□□ 0.24
USP6NL-204ENST00000606752 LGALS1P09382 135 aaKnown RBP16.54■□□□□ 0.24
USP6NL-204ENST00000606752 ATF4P18848 351 aaPredicted RBP16.54■□□□□ 0.24
USP6NL-204ENST00000606752 RNF212Q495C1 297 aa16.54■□□□□ 0.24
USP6NL-204ENST00000606752 ATG101Q9BSB4 218 aa16.54■□□□□ 0.24
USP6NL-204ENST00000606752 TMEM242Q9NWH2 141 aa16.54■□□□□ 0.24
USP6NL-204ENST00000606752 IGHV3-66A0A0C4DH42 116 aa16.54■□□□□ 0.24
USP6NL-204ENST00000606752 ZNF320A2RRD8 509 aa16.54■□□□□ 0.24
USP6NL-204ENST00000606752 GALR1P47211 349 aa16.54■□□□□ 0.24
USP6NL-204ENST00000606752 GNG4P50150 75 aa16.54■□□□□ 0.24
USP6NL-204ENST00000606752 FAM106AQ4KMX7 169 aa16.54■□□□□ 0.24
USP6NL-204ENST00000606752 GPHB5Q86YW7 130 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms