RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 SH2D6Q7Z4S9 175 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 ARRDC1Q8N5I2 433 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 STPG4Q8N801 248 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 TMEM75Q8N9X5 138 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 ZBTB8BQ8NAP8 495 aaPredicted RBP2.67□□□□□ -1.98
HERC3-213ENST00000598772 OR8A1Q8NGG7 326 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 RAB3CQ96E17 227 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 ZNF479Q96JC4 524 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 ARPC5LQ9BPX5 153 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 RETNLBQ9BQ08 111 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 SIKE1Q9BRV8 207 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 PLEKHA2Q9HB19 425 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 AMBNQ9NP70 447 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 ENY2Q9NPA8 101 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 PLAC8Q9NZF1 115 aa2.67□□□□□ -1.98
HERC3-213ENST00000598772 TRBV5-5A0A0J9YX44 114 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 TCRBV5S2A0A599 114 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 CORTO00230 105 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 RBFOX2O43251 390 aaKnown RBP eCLIP2.66□□□□□ -1.98
HERC3-213ENST00000598772 GHRHP01286 108 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 IFNA7P01567 189 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 PFN1P07737 140 aaKnown RBP2.66□□□□□ -1.98
HERC3-213ENST00000598772 IGLC1P0CG04 106 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 CT45A10P0DMU9 189 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 RFX2P48378 723 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 HSPA13P48723 471 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 MEOX2P50222 304 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 CCR6P51684 374 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 OR10A3P58181 314 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 YPEL3P61236 119 aaPredicted RBP2.66□□□□□ -1.98
HERC3-213ENST00000598772 HSPE1P61604 102 aaKnown RBP2.66□□□□□ -1.98
HERC3-213ENST00000598772 SUPT4H1P63272 117 aaKnown RBP2.66□□□□□ -1.98
HERC3-213ENST00000598772 MEF2DQ14814 521 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 Q6ZRP5 223 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 H2BFWTQ7Z2G1 175 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 SLC35G3Q8N808 338 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 NKAIN3Q8N8D7 197 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 CCDC71LQ8N9Z2 235 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 ZNF680Q8NEM1 530 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 OR56B1Q8NGI3 324 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 SPACA4Q8TDM5 124 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 FCAMRQ8WWV6 532 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 DNAJC9Q8WXX5 260 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 NPIPB3Q92617 1050 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 CMTM5Q96DZ9 223 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 SAT2Q96F10 170 aaPredicted RBP2.66□□□□□ -1.98
HERC3-213ENST00000598772 LINC00477Q96M19 166 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 CENPOQ9BU64 300 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 PLGRKTQ9HBL7 147 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 COMMD9Q9P000 198 aa2.66□□□□□ -1.98
HERC3-213ENST00000598772 SNTNA6NMZ2 147 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 WBP4O75554 376 aaKnown RBP2.65□□□□□ -1.99
HERC3-213ENST00000598772 DIRAS3O95661 229 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 TOMM40O96008 361 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 FGF2P09038 288 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 CTXN2P0C2S0 81 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 PTHLHP12272 177 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 FCGR2CP31995 323 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 TIRAPP58753 221 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 CNBPP62633 177 aaKnown RBP2.65□□□□□ -1.99
HERC3-213ENST00000598772 MT1HP80294 61 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 QRFPP83859 136 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 RPL19P84098 196 aaKnown RBP2.65□□□□□ -1.99
HERC3-213ENST00000598772 C1orf194Q5T5A4 169 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 PRSS54Q6PEW0 395 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 TMPRSS11AQ6ZMR5 421 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 DEFB107AQ8IZN7 70 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 FAM89BQ8N5H3 189 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 TRUB1Q8WWH5 349 aaKnown RBP2.65□□□□□ -1.99
HERC3-213ENST00000598772 TSC22D3Q99576 134 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 C20orf144Q9BQM9 153 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 PYGO2Q9BRQ0 406 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 C1orf43Q9BWL3 253 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 KRTAP4-1Q9BYQ7 146 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 TMBIM4Q9HC24 238 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 DAPK2Q9UIK4 370 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 TMEM56-RWDD3S4R434 201 aa2.65□□□□□ -1.99
HERC3-213ENST00000598772 TRAV8-2A0A0B4J237 113 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 hDV102S1A0JD36 115 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 FABP12A6NFH5 140 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 RLN1P04808 185 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 OR10J4P0C629 311 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 RNASE2P10153 161 aaKnown RBP2.64□□□□□ -1.99
HERC3-213ENST00000598772 GATA1P15976 413 aaPredicted RBP2.64□□□□□ -1.99
HERC3-213ENST00000598772 GADD45AP24522 165 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 F2RP25116 425 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 RNASE4P34096 147 aaKnown RBP2.64□□□□□ -1.99
HERC3-213ENST00000598772 ARPC4P59998 168 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 RPS11P62280 158 aaKnown RBP eCLIP2.64□□□□□ -1.99
HERC3-213ENST00000598772 CIRBPQ14011 172 aaKnown RBP2.64□□□□□ -1.99
HERC3-213ENST00000598772 IZUMO4Q1ZYL8 232 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 CCDC58Q4VC31 144 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 C1orf100Q5SVJ3 147 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 STEAP1BQ6NZ63 245 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 TMEM17Q86X19 198 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 EIF4E3Q8N5X7 224 aaKnown RBP2.64□□□□□ -1.99
HERC3-213ENST00000598772 C11orf72Q8NBR9 251 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 OR4C5Q8NGB2 326 aa2.64□□□□□ -1.99
HERC3-213ENST00000598772 RPUSD4Q96CM3 377 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms