RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 CCL20P78556 96 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 SMIM21Q3B7S5 101 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 SPINK14Q6IE38 97 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 CLVS1Q8IUQ0 354 aaPredicted RBP2.79□□□□□ -1.96
LINC01539-206ENST00000593282 RNF175Q8N4F7 328 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 LINC00612Q8N6U2 182 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 PACRGLQ8N7B6 248 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 DAND5Q8N907 189 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 ZNF709Q8N972 641 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 OR8J3Q8NGG0 315 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 OR4D11Q8NGI4 311 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 MBD3L1Q8WWY6 194 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 HIST1H2BAQ96A08 127 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 MAGOHBQ96A72 148 aaKnown RBP2.79□□□□□ -1.96
LINC01539-206ENST00000593282 UBE2WQ96B02 151 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 TM2D3Q9BRN9 247 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 UPK3BQ9BT76 320 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 DOHHQ9BU89 302 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 IMUPQ9GZP8 106 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 TRAPPC1Q9Y5R8 145 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 NUBP2Q9Y5Y2 271 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 CROCCQ5TZA2 2017 aa2.79□□□□□ -1.96
LINC01539-206ENST00000593282 ZFC3H1O60293 1989 aaKnown RBP2.79□□□□□ -1.96
LINC01539-206ENST00000593282 AGRNO00468 2067 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 ZNF106Q9H2Y7 1883 aaKnown RBP2.78□□□□□ -1.96
LINC01539-206ENST00000593282 IGLV4-69A0A075B6H9 119 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 IGKV1OR2-108A0A075B7D4 117 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 TRAV38-1A0A0B4J264 116 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 A6NED7 52 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 A8MUU9 505 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 I3L521 148 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 SLC25A20O43772 301 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 BANF1O75531 89 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 NDUFB2O95178 105 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 IFNA10P01566 189 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 ZNF19P17023 458 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 HIST1H2BOP23527 126 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 HIST1H2BBP33778 126 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 ARPP19P56211 112 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 HIST1H2BDP58876 126 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 HIST1H2BCP62807 126 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 NDPQ00604 133 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 HIST2H2BEQ16778 126 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.78□□□□□ -1.96
LINC01539-206ENST00000593282 SSX8Q7RTT4 187 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 ANGPTL5Q86XS5 388 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 TMEM86AQ8N2M4 240 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 RPRMLQ8N4K4 120 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 UBALD1Q8TB05 177 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 FNDC9Q8TBE3 224 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 H1FXQ92522 213 aaKnown RBP2.78□□□□□ -1.96
LINC01539-206ENST00000593282 HIST1H2BHQ93079 126 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 ADAT3Q96EY9 351 aaPredicted RBP2.78□□□□□ -1.96
LINC01539-206ENST00000593282 HIST1H2BNQ99877 126 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 HIST1H2BMQ99879 126 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 MED11Q9P086 117 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 OR5V1Q9UGF6 321 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 ICOSQ9Y6W8 199 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 COL6A6A6NMZ7 2263 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 RP1P56715 2156 aa2.78□□□□□ -1.96
LINC01539-206ENST00000593282 DOPEY2Q9Y3R5 2298 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 LRRK2Q5S007 2527 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 IGLV3-10A0A075B6K4 115 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 TRAV41A0A0B4J266 112 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 A0A1B0GX51 115 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 J3KT08 172 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 DEGS1O15121 323 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 CCL3P10147 92 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 HMGA1P17096 107 aaKnown RBP2.77□□□□□ -1.97
LINC01539-206ENST00000593282 RPL7P18124 248 aaKnown RBP2.77□□□□□ -1.97
LINC01539-206ENST00000593282 S100A7P31151 101 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 GABRA2P47869 451 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 POLR2HP52434 150 aaKnown RBP2.77□□□□□ -1.97
LINC01539-206ENST00000593282 CKS1BP61024 79 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 ZNF616Q08AN1 781 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 ZNF816Q0VGE8 651 aaPredicted RBP2.77□□□□□ -1.97
LINC01539-206ENST00000593282 RPL22L1Q6P5R6 122 aaKnown RBP2.77□□□□□ -1.97
LINC01539-206ENST00000593282 SLC25A34Q6PIV7 304 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 SPATA12Q7Z6I5 190 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 LRRC18Q8N456 261 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 RPS4Y2Q8TD47 263 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 PKMYT1Q99640 499 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 LAMTOR3Q9UHA4 124 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 FUT9Q9Y231 359 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 ZNF835Q9Y2P0 537 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 USP9XQ93008 2570 aaPredicted RBP2.77□□□□□ -1.97
LINC01539-206ENST00000593282 BSNQ9UPA5 3926 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 SPTAN1Q13813 2472 aaKnown RBP2.77□□□□□ -1.97
LINC01539-206ENST00000593282 TEX15Q9BXT5 2789 aa2.77□□□□□ -1.97
LINC01539-206ENST00000593282 NUP214P35658 2090 aaPredicted RBP2.77□□□□□ -1.97
LINC01539-206ENST00000593282 BORCS7-ASMTA0A0B4J1R7 106 aa2.76□□□□□ -1.97
LINC01539-206ENST00000593282 DUXBA0A1W2PPF3 345 aa2.76□□□□□ -1.97
LINC01539-206ENST00000593282 DHRS12A0PJE2 317 aa2.76□□□□□ -1.97
LINC01539-206ENST00000593282 PROSCO94903 275 aa2.76□□□□□ -1.97
LINC01539-206ENST00000593282 PRM2P04554 102 aa2.76□□□□□ -1.97
LINC01539-206ENST00000593282 BPGMP07738 259 aa2.76□□□□□ -1.97
LINC01539-206ENST00000593282 RPS3P23396 243 aaKnown RBP eCLIP2.76□□□□□ -1.97
LINC01539-206ENST00000593282 SRIP30626 198 aa2.76□□□□□ -1.97
LINC01539-206ENST00000593282 LPAR6P43657 344 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms