RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 APELAP0DMC3 54 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 SIGLEC15Q6ZMC9 328 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 GOLT1AQ6ZVE7 132 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 CIARTQ8N365 385 aaPredicted RBP9.18□□□□□ -0.94
ZNF540-210ENST00000592533 ZNF48Q96MX3 618 aaPredicted RBP9.18□□□□□ -0.94
ZNF540-210ENST00000592533 PPIAL4CA0A0B4J2A2 164 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 H3BTX0 84 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 PPIAL4GP0DN37 164 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 BPIFA4PQ86YQ2 179 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 EXOC3-AS1Q8N2X6 119 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 CLEC5AQ9NY25 188 aa9.18□□□□□ -0.94
ZNF540-210ENST00000592533 TRAV8-1A0A0A6YYK1 113 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 WI2-2373I1.2A0A1W2PRP0 233 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 LIPFP07098 398 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 NPBQ8NG41 125 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 POLEQ07864 2286 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 CHEK1O14757 476 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 NDUFA3O95167 84 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 DLX1P56177 255 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 TCF15Q12870 199 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 Q6AWC8 147 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 ZC2HC1AQ96GY0 325 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 VKORC1Q9BQB6 163 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 LAMA5O15230 3695 aa9.17□□□□□ -0.94
ZNF540-210ENST00000592533 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.16□□□□□ -0.94
ZNF540-210ENST00000592533 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.16□□□□□ -0.94
ZNF540-210ENST00000592533 OR4C46A6NHA9 309 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 SH2D7A6NKC9 451 aaPredicted RBP9.16□□□□□ -0.94
ZNF540-210ENST00000592533 LEPROTL1O95214 131 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 PRNTQ86SH4 94 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 ZNF491Q8N8L2 437 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 OR11H6Q8NGC7 330 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 SH3BGRL2Q9UJC5 107 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 A0A1B0GUT8 65 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 PDE6HQ13956 83 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 PSG3Q16557 428 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 PET117Q6UWS5 81 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 CFHR4Q92496 578 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 HLA-DRB1P01911 266 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 FBXL19-AS1Q494R0 122 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 RAB1BQ9H0U4 201 aa9.16□□□□□ -0.94
ZNF540-210ENST00000592533 K7EQM0 130 aa9.15□□□□□ -0.94
ZNF540-210ENST00000592533 M0QZ24 198 aa9.15□□□□□ -0.94
ZNF540-210ENST00000592533 COX7A1P24310 79 aa9.15□□□□□ -0.94
ZNF540-210ENST00000592533 RIGQ13278 110 aa9.15□□□□□ -0.94
ZNF540-210ENST00000592533 LDLRAD2Q5SZI1 272 aa9.15□□□□□ -0.94
ZNF540-210ENST00000592533 COX8CQ7Z4L0 72 aa9.15□□□□□ -0.94
ZNF540-210ENST00000592533 ARL6IP6Q8N6S5 226 aa9.15□□□□□ -0.94
ZNF540-210ENST00000592533 RNF125Q96EQ8 232 aa9.15□□□□□ -0.94
ZNF540-210ENST00000592533 ZNF414Q96IQ9 312 aa9.15□□□□□ -0.94
ZNF540-210ENST00000592533 TIMM23O14925 209 aa9.15□□□□□ -0.95
ZNF540-210ENST00000592533 NBR2O15453 112 aa9.15□□□□□ -0.95
ZNF540-210ENST00000592533 SIAH2O43255 324 aa9.15□□□□□ -0.95
ZNF540-210ENST00000592533 CD24P25063 80 aa9.15□□□□□ -0.95
ZNF540-210ENST00000592533 ZNF493Q6ZR52 646 aa9.15□□□□□ -0.95
ZNF540-210ENST00000592533 Q71RC1 249 aaPredicted RBP9.15□□□□□ -0.95
ZNF540-210ENST00000592533 PSG8Q9UQ74 426 aa9.15□□□□□ -0.95
ZNF540-210ENST00000592533 ACACAQ13085 2346 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 TRAV30A0A087WSZ9 112 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 SERTM2A0A1B0GWG4 89 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 LINC00173Q6ZV60 143 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 S100A7AQ86SG5 101 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 TMEM191AQ9H0A3 160 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 HSPB8Q9UJY1 196 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 COX11Q9Y6N1 276 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 PLGLAQ15195 96 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 NEU4Q8WWR8 484 aaPredicted RBP9.14□□□□□ -0.95
ZNF540-210ENST00000592533 APC2O95996 2303 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 NPIPB5A8MRT5 1133 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 ODF3BA8MYP8 253 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 LYNX1G3V0Z9 82 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 LYNX1P0DP58 116 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 HINT1P49773 126 aaPredicted RBP9.14□□□□□ -0.95
ZNF540-210ENST00000592533 PRB3Q04118 309 aaPredicted RBP9.14□□□□□ -0.95
ZNF540-210ENST00000592533 PRR30Q53SZ7 412 aaPredicted RBP9.14□□□□□ -0.95
ZNF540-210ENST00000592533 C17orf77Q96MU5 243 aa9.14□□□□□ -0.95
ZNF540-210ENST00000592533 CNIH1O95406 144 aa9.13□□□□□ -0.95
ZNF540-210ENST00000592533 ARMS2P0C7Q2 107 aa9.13□□□□□ -0.95
ZNF540-210ENST00000592533 HTR1DP28221 377 aa9.13□□□□□ -0.95
ZNF540-210ENST00000592533 CRIP1P50238 77 aa9.13□□□□□ -0.95
ZNF540-210ENST00000592533 ZNF672Q499Z4 452 aaPredicted RBP9.13□□□□□ -0.95
ZNF540-210ENST00000592533 LINC01545Q5VT33 79 aa9.13□□□□□ -0.95
ZNF540-210ENST00000592533 MAP1LC3CQ9BXW4 147 aa9.13□□□□□ -0.95
ZNF540-210ENST00000592533 MS4A6AQ9H2W1 248 aa9.13□□□□□ -0.95
ZNF540-210ENST00000592533 DPM3Q9P2X0 92 aa9.13□□□□□ -0.95
ZNF540-210ENST00000592533 IGLV11-55A0A075B6I3 123 aa9.13□□□□□ -0.95
ZNF540-210ENST00000592533 IGFBPL1Q8WX77 278 aa9.13□□□□□ -0.95
ZNF540-210ENST00000592533 KALRNO60229 2985 aa9.12□□□□□ -0.95
ZNF540-210ENST00000592533 M0R1W7 72 aa9.12□□□□□ -0.95
ZNF540-210ENST00000592533 RELQ04864 619 aaPredicted RBP9.12□□□□□ -0.95
ZNF540-210ENST00000592533 PRR31Q5SQ13 230 aa9.12□□□□□ -0.95
ZNF540-210ENST00000592533 SCRT2Q9NQ03 307 aa9.12□□□□□ -0.95
ZNF540-210ENST00000592533 U3KQK5 164 aa9.12□□□□□ -0.95
ZNF540-210ENST00000592533 ABCA1O95477 2261 aa9.12□□□□□ -0.95
ZNF540-210ENST00000592533 IL4P05112 153 aa9.12□□□□□ -0.95
ZNF540-210ENST00000592533 CEACAM3P40198 252 aa9.12□□□□□ -0.95
ZNF540-210ENST00000592533 ZNF738Q8NE65 137 aa9.12□□□□□ -0.95
ZNF540-210ENST00000592533 TMUB1Q9BVT8 246 aa9.12□□□□□ -0.95
ZNF540-210ENST00000592533 ATMQ13315 3056 aa9.12□□□□□ -0.95
ZNF540-210ENST00000592533 FBLL1A6NHQ2 334 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms