RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 MGST1P10620 155 aaKnown RBP7.84□□□□□ -1.15
VPS25-202ENST00000589219 FCGR2BP31994 310 aaPredicted RBP7.84□□□□□ -1.15
VPS25-202ENST00000589219 MFAP4P55083 255 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 CX3CL1P78423 397 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 NDPQ00604 133 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 KRTAP1-1Q07627 177 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 DYNAPQ8N1N2 210 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 SPATA3Q8NHX4 192 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 MDFIQ99750 246 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 SHANK2-AS3Q9BTD1 123 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 GPR61Q9BZJ8 451 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 EPDR1Q9UM22 224 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 KLF12Q9Y4X4 402 aa7.84□□□□□ -1.15
VPS25-202ENST00000589219 TRBV6-1A0A0K0K1D8 114 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 SLC17A3O00476 420 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 NPFFO15130 113 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 GNG7O60262 68 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 OR5I1Q13606 314 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 KLK9Q2XQG4 91 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 ASPHD1Q5U4P2 390 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 ZNF600Q6ZNG1 722 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 BAGE2Q86Y30 109 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 BPIFA4PQ86YQ2 179 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 LYPD1Q8N2G4 141 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 Q8N9W7 124 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 OR4F17Q8NGA8 305 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 FAM110DQ8TAY7 271 aaPredicted RBP7.83□□□□□ -1.16
VPS25-202ENST00000589219 BLNKQ8WV28 456 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 RNF125Q96EQ8 232 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 FANCD2OSQ96PS1 177 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 TXN2Q99757 166 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 FAM103A1Q9BTL3 118 aaKnown RBP7.83□□□□□ -1.16
VPS25-202ENST00000589219 Q9H3A6 140 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 YAE1D1Q9NRH1 226 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 C21orf62Q9NYP8 219 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 KLK9Q9UKQ9 250 aa7.83□□□□□ -1.16
VPS25-202ENST00000589219 SONP18583 2426 aaKnown RBP7.83□□□□□ -1.16
VPS25-202ENST00000589219 IGHV7-81A0A0B4J1V7 117 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 WI2-2373I1.2A0A1W2PRP0 233 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 SMIM27A0A1W2PRY6 76 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 PGPA6NDG6 321 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 PCP4L1A6NKN8 68 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 ZNF705GA8MUZ8 300 aaPredicted RBP7.82□□□□□ -1.16
VPS25-202ENST00000589219 GATCO43716 136 aaKnown RBP7.82□□□□□ -1.16
VPS25-202ENST00000589219 SLC25A16P16260 332 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 CD24P25063 80 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 SAA4P35542 130 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 RANP62826 216 aaKnown RBP7.82□□□□□ -1.16
VPS25-202ENST00000589219 RASL11AQ6T310 242 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 OR10D4PQ8NGN7 298 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 VN1R17PQ8TDU5 208 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 FAM168AQ92567 244 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 GRAMD2BQ96HH9 432 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 PACRGQ96M98 296 aaPredicted RBP7.82□□□□□ -1.16
VPS25-202ENST00000589219 GPR82Q96P67 336 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 HIST1H2BLQ99880 126 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 GNB1LQ9BYB4 327 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 RNASE7Q9H1E1 156 aaKnown RBP7.82□□□□□ -1.16
VPS25-202ENST00000589219 NIT2Q9NQR4 276 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 ZNF492Q9P255 531 aa7.82□□□□□ -1.16
VPS25-202ENST00000589219 COL6A5A8TX70 2615 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 ATRQ13535 2644 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 IGHV4-30-2A0A087WSY4 118 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 HLA-DQA1P01909 254 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 TCRAP04437 139 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 AMY1AP04745 511 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 IL4P05112 153 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 FABP4P15090 132 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 GNG5P63218 68 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 PAX8Q06710 450 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 LOXL1Q08397 574 aaPredicted RBP7.81□□□□□ -1.16
VPS25-202ENST00000589219 PDE6HQ13956 83 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 FBLN7Q53RD9 439 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 Q56UQ5 140 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 CT83Q5H943 113 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 GFI1BQ5VTD9 330 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 Q86TA4 180 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 OR8I2Q8N0Y5 310 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 ZNF491Q8N8L2 437 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 CMTM2Q8TAZ6 248 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 C10orf105Q8TEF2 133 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 TMEM18Q96B42 140 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 AJUBAQ96IF1 538 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 MRPL18Q9H0U6 180 aaKnown RBP7.81□□□□□ -1.16
VPS25-202ENST00000589219 C7orf69Q9H7B7 122 aa7.81□□□□□ -1.16
VPS25-202ENST00000589219 FBN1P35555 2871 aaKnown RBP7.81□□□□□ -1.16
VPS25-202ENST00000589219 TRBV19A0A075B6N1 114 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 SERTM2A0A1B0GWG4 89 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 IZUMO1RA6ND01 250 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 SNURFLB1AK76 121 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 VWC2LB2RUY7 222 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 LTAP01374 205 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 AMBPP02760 352 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 IGLC2P0DOY2 106 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 CBLN1P23435 193 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 ADMP35318 185 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 USF2Q15853 346 aaPredicted RBP7.8□□□□□ -1.16
VPS25-202ENST00000589219 PDZD11Q5EBL8 140 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 PYY3Q5JQD4 70 aa7.8□□□□□ -1.16
VPS25-202ENST00000589219 ATP5L2Q7Z4Y8 100 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms