RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 TOMM20LQ6UXN7 152 aa9.33□□□□□ -0.92
CCBE1-203ENST00000589116 RPUSD4Q96CM3 377 aaKnown RBP9.33□□□□□ -0.92
CCBE1-203ENST00000589116 ZNF414Q96IQ9 312 aa9.33□□□□□ -0.92
CCBE1-203ENST00000589116 KLK15Q9H2R5 256 aa9.33□□□□□ -0.92
CCBE1-203ENST00000589116 GNB4Q9HAV0 340 aa9.33□□□□□ -0.92
CCBE1-203ENST00000589116 NAT8Q9UHE5 227 aa9.33□□□□□ -0.92
CCBE1-203ENST00000589116 GGTLC3B5MD39 225 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 ELANEP08246 267 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 NBEAP1P0C6P0 100 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 HIST1H1EP10412 219 aaKnown RBP9.32□□□□□ -0.92
CCBE1-203ENST00000589116 RPL15P61313 204 aaKnown RBP9.32□□□□□ -0.92
CCBE1-203ENST00000589116 FOXE3Q13461 319 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 LEMD1Q68G75 181 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 TEX38Q6PEX7 206 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 OR4F17Q8NGA8 305 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 TLN2Q9Y4G6 2542 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 SCO2A0A1W2PP80 73 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 B4DEV8 164 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 CRLF1O75462 422 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 NPPCP23582 126 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 ZNF674Q2M3X9 581 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 SDF2L1Q9HCN8 221 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 CDC42EP3Q9UKI2 254 aa9.32□□□□□ -0.92
CCBE1-203ENST00000589116 C7orf77A4D0Y5 90 aa9.31□□□□□ -0.92
CCBE1-203ENST00000589116 NDUFB4O95168 129 aa9.31□□□□□ -0.92
CCBE1-203ENST00000589116 IGLC2P0DOY2 106 aa9.31□□□□□ -0.92
CCBE1-203ENST00000589116 RPL7P18124 248 aaKnown RBP9.31□□□□□ -0.92
CCBE1-203ENST00000589116 MYCNOSP40205 109 aa9.31□□□□□ -0.92
CCBE1-203ENST00000589116 SUMO1P63165 101 aaKnown RBP9.31□□□□□ -0.92
CCBE1-203ENST00000589116 BTN1A1Q13410 526 aa9.31□□□□□ -0.92
CCBE1-203ENST00000589116 TMEM241Q24JQ0 296 aa9.31□□□□□ -0.92
CCBE1-203ENST00000589116 ZNF329Q86UD4 541 aa9.31□□□□□ -0.92
CCBE1-203ENST00000589116 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
CCBE1-203ENST00000589116 OR4X2Q8NGF9 303 aa9.31□□□□□ -0.92
CCBE1-203ENST00000589116 DUX5Q96PT3 197 aa9.31□□□□□ -0.92
CCBE1-203ENST00000589116 PPP5D1E7EU14 171 aa9.3□□□□□ -0.92
CCBE1-203ENST00000589116 NDUFA4O00483 81 aa9.3□□□□□ -0.92
CCBE1-203ENST00000589116 MRPS12O15235 138 aaKnown RBP9.3□□□□□ -0.92
CCBE1-203ENST00000589116 SRD5A1P18405 259 aa9.3□□□□□ -0.92
CCBE1-203ENST00000589116 PDE6HQ13956 83 aa9.3□□□□□ -0.92
CCBE1-203ENST00000589116 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
CCBE1-203ENST00000589116 GPR82Q96P67 336 aa9.3□□□□□ -0.92
CCBE1-203ENST00000589116 METTL26Q96S19 204 aa9.3□□□□□ -0.92
CCBE1-203ENST00000589116 C20orf24Q9BUV8 137 aa9.3□□□□□ -0.92
CCBE1-203ENST00000589116 RPS10P5Q9NQ39 176 aa9.3□□□□□ -0.92
CCBE1-203ENST00000589116 A0A087WWC5 75 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 IGHV3-35A0A0C4DH35 117 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 C9JCJ5 164 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 IGHV3-11P01762 117 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 C1orf194Q5T5A4 169 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 LYPD1Q8N2G4 141 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 ZNF418Q8TF45 676 aaPredicted RBP9.29□□□□□ -0.92
CCBE1-203ENST00000589116 BLNKQ8WV28 456 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 HIST1H2BAQ96A08 127 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 ELOVL1Q9BW60 279 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 SERTAD4Q9NUC0 356 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 ZNF586Q9NXT0 402 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 PRELID1Q9Y255 219 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 TRBV19A0A075B6N1 114 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 CLPSL1A2RUU4 121 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 FAM181BA6NEQ2 426 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 DNASE2O00115 360 aaPredicted RBP9.29□□□□□ -0.92
CCBE1-203ENST00000589116 GGCTO75223 188 aaKnown RBP9.29□□□□□ -0.92
CCBE1-203ENST00000589116 RNASE1P07998 156 aaKnown RBP9.29□□□□□ -0.92
CCBE1-203ENST00000589116 CRYBB3P26998 211 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 RANP62826 216 aaKnown RBP9.29□□□□□ -0.92
CCBE1-203ENST00000589116 LCNL1Q6ZST4 164 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 C5orf17Q8NAS9 161 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 C2CD4CQ8TF44 421 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 DERL1Q9BUN8 251 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 Q9H3A6 140 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 ESM1Q9NQ30 184 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 OTORQ9NRC9 128 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 SMCO4Q9NRQ5 59 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 PEF1Q9UBV8 284 aaKnown RBP9.29□□□□□ -0.92
CCBE1-203ENST00000589116 LY96Q9Y6Y9 160 aa9.29□□□□□ -0.92
CCBE1-203ENST00000589116 SONP18583 2426 aaKnown RBP9.28□□□□□ -0.92
CCBE1-203ENST00000589116 BUB3O43684 328 aa9.28□□□□□ -0.92
CCBE1-203ENST00000589116 TRBV12-3P01733 135 aa9.28□□□□□ -0.92
CCBE1-203ENST00000589116 RPL35P42766 123 aaKnown RBP9.28□□□□□ -0.92
CCBE1-203ENST00000589116 RPL23P62829 140 aaKnown RBP9.28□□□□□ -0.92
CCBE1-203ENST00000589116 Q6ZSV7 163 aa9.28□□□□□ -0.92
CCBE1-203ENST00000589116 OR8I2Q8N0Y5 310 aa9.28□□□□□ -0.92
CCBE1-203ENST00000589116 U3KQE9 123 aa9.28□□□□□ -0.92
CCBE1-203ENST00000589116 PGPA6NDG6 321 aa9.27□□□□□ -0.93
CCBE1-203ENST00000589116 HELTA6NFD8 242 aa9.27□□□□□ -0.93
CCBE1-203ENST00000589116 PEX7O00628 323 aa9.27□□□□□ -0.93
CCBE1-203ENST00000589116 ZNF253O75346 499 aa9.27□□□□□ -0.93
CCBE1-203ENST00000589116 SLC25A5P05141 298 aaKnown RBP9.27□□□□□ -0.93
CCBE1-203ENST00000589116 RPLP1P05386 114 aaKnown RBP9.27□□□□□ -0.93
CCBE1-203ENST00000589116 AKR1C3P42330 323 aa9.27□□□□□ -0.93
CCBE1-203ENST00000589116 HILS1P60008 231 aa9.27□□□□□ -0.93
CCBE1-203ENST00000589116 ADIRFQ15847 76 aa9.27□□□□□ -0.93
CCBE1-203ENST00000589116 C10orf99Q6UWK7 81 aa9.27□□□□□ -0.93
CCBE1-203ENST00000589116 UBE2E2Q96LR5 201 aa9.27□□□□□ -0.93
CCBE1-203ENST00000589116 JMJD8Q96S16 334 aa9.27□□□□□ -0.93
CCBE1-203ENST00000589116 TUBA4BQ9H853 241 aa9.27□□□□□ -0.93
CCBE1-203ENST00000589116 TRBV20OR9-2A0A075B6H5 130 aa9.26□□□□□ -0.93
CCBE1-203ENST00000589116 A0A087X0K7 114 aa9.26□□□□□ -0.93
CCBE1-203ENST00000589116 TSPAN4O14817 238 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms