RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 RPUSD4Q96CM3 377 aaKnown RBP6.04□□□□□ -1.44
VMP1-204ENST00000587259 TVP23CQ96ET8 276 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 RARRES2Q99969 163 aa6.04□□□□□ -1.44
VMP1-204ENST00000587259 IGKV1D-37A0A075B6S9 117 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 A0A087WWC5 75 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 A0A1W2PRE2 83 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 FAM223BA6NKX1 122 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 ZNF727A8MUV8 499 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 K7EIM0 57 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 PAGE4O60829 102 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 TOMM40O96008 361 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 RPLP1P05386 114 aaKnown RBP6.03□□□□□ -1.44
VMP1-204ENST00000587259 IGLC1P0CG04 106 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 MFAP2P55001 183 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 GUCA2BQ16661 112 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 CST9LP1Q5W188 147 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 ZFAND6Q6FIF0 208 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 UNQ5815/PRO19632Q6UWF5 114 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 FAM223AQ8IWN6 122 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 NECAP1Q8NC96 275 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 OR51G1Q8NGK1 321 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 MRPL18Q9H0U6 180 aaKnown RBP6.03□□□□□ -1.44
VMP1-204ENST00000587259 TUBA4BQ9H853 241 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 SEPSECSQ9HD40 501 aaKnown RBP6.03□□□□□ -1.44
VMP1-204ENST00000587259 SMCO4Q9NRQ5 59 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 C21orf62Q9NYP8 219 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 NAT8Q9UHE5 227 aa6.03□□□□□ -1.44
VMP1-204ENST00000587259 TRBV7-1A0A0A6YYK4 115 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 CXorf65A6NEN9 183 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 C9JQL5 133 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 F8W735 103 aaPredicted RBP6.02□□□□□ -1.45
VMP1-204ENST00000587259 H3BQ15 152 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 CCL24O00175 119 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 ATP6V0E1O15342 81 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 IGF1P05019 195 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 RD3LP0DJH9 198 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 APELAP0DMC3 54 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 MYCNOSP40205 109 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 RAB9AP51151 201 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 CEBPGP53567 150 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 CD81P60033 236 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 UBE2L3P68036 154 aaKnown RBP6.02□□□□□ -1.45
VMP1-204ENST00000587259 GCSAMLQ5JQS6 135 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 FAM90A2PQ658T7 463 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 LINC00305Q7Z4B0 112 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 SBSPONQ8IVN8 264 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 MUC7Q8TAX7 377 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 Q8WTZ3 238 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 EEF1AKMT3Q96AZ1 226 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 SMIM7Q9BQ49 75 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 FAM103A1Q9BTL3 118 aaKnown RBP6.02□□□□□ -1.45
VMP1-204ENST00000587259 CTDSP1Q9GZU7 261 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 ZNF355PQ9NSJ1 428 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 TMEM242Q9NWH2 141 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 DOK5Q9P104 306 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 HIGD1AQ9Y241 93 aa6.02□□□□□ -1.45
VMP1-204ENST00000587259 PUS1Q9Y606 427 aaKnown RBP eCLIP6.02□□□□□ -1.45
VMP1-204ENST00000587259 DYNC2H1Q8NCM8 4307 aaKnown RBP6.02□□□□□ -1.45
VMP1-204ENST00000587259 TRAV41A0A0B4J266 112 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 C7orf77A4D0Y5 90 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 FAM74A7A6NL05 159 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 C3orf84H3BNL1 204 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 AP4M1O00189 453 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 NUPL2O15504 423 aaKnown RBP6.01□□□□□ -1.45
VMP1-204ENST00000587259 NDUFB8O95169 186 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 OR2C1O95371 312 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 NHLRC4P0CG21 123 aaPredicted RBP6.01□□□□□ -1.45
VMP1-204ENST00000587259 NDPQ00604 133 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 ZNF90Q03938 601 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 BTN1A1Q13410 526 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 MLANAQ16655 118 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 ECSCRQ19T08 205 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 TMEM241Q24JQ0 296 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 Q56UQ5 140 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 ASPHD1Q5U4P2 390 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 MIR17HGQ75NE6 70 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 C15orf54Q8N8G6 183 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 OR1B1Q8NGR6 318 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 TMEM37Q8WXS4 190 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 C11orf52Q96A22 123 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 BTF3L4Q96K17 158 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 FANCD2OSQ96PS1 177 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 PAXXQ9BUH6 204 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 MCRIP2Q9BUT9 160 aaKnown RBP6.01□□□□□ -1.45
VMP1-204ENST00000587259 GPR61Q9BZJ8 451 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 PARLQ9H300 379 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 OR51M1Q9H341 326 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 RPS10P5Q9NQ39 176 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 TMEM14CQ9P0S9 112 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 FBXL7Q9UJT9 491 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 DMRT1Q9Y5R6 373 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 LY96Q9Y6Y9 160 aa6.01□□□□□ -1.45
VMP1-204ENST00000587259 BIRC6Q9NR09 4857 aa6□□□□□ -1.45
VMP1-204ENST00000587259 HUWE1Q7Z6Z7 4374 aaKnown RBP6□□□□□ -1.45
VMP1-204ENST00000587259 TRBV9A0A0B4J1U6 114 aa6□□□□□ -1.45
VMP1-204ENST00000587259 C9JCJ5 164 aa6□□□□□ -1.45
VMP1-204ENST00000587259 BMPR1BO00238 502 aa6□□□□□ -1.45
VMP1-204ENST00000587259 PPP1R2P9O14990 202 aa6□□□□□ -1.45
VMP1-204ENST00000587259 IGHG2P01859 326 aa6□□□□□ -1.45
VMP1-204ENST00000587259 MT-ND4LP03901 98 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms