RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 NIPBLQ6KC79 2804 aaeCLIP8.83□□□□□ -1
LIG3-204ENST00000585740 J3QLI3 93 aa8.83□□□□□ -1
LIG3-204ENST00000585740 M0QZK8 103 aa8.83□□□□□ -1
LIG3-204ENST00000585740 PHOX2AO14813 284 aa8.83□□□□□ -1
LIG3-204ENST00000585740 ATP6V0E1O15342 81 aa8.83□□□□□ -1
LIG3-204ENST00000585740 IGLV2-8P01709 118 aa8.83□□□□□ -1
LIG3-204ENST00000585740 MGST1P10620 155 aaKnown RBP8.83□□□□□ -1
LIG3-204ENST00000585740 CDX1P47902 265 aaPredicted RBP8.83□□□□□ -1
LIG3-204ENST00000585740 KRTAP10-9P60411 292 aa8.83□□□□□ -1
LIG3-204ENST00000585740 ECSCRQ19T08 205 aa8.83□□□□□ -1
LIG3-204ENST00000585740 CLEC12BQ2HXU8 276 aa8.83□□□□□ -1
LIG3-204ENST00000585740 ACTL10Q5JWF8 245 aa8.83□□□□□ -1
LIG3-204ENST00000585740 BAGE2Q86Y30 109 aa8.83□□□□□ -1
LIG3-204ENST00000585740 FRZBQ92765 325 aa8.83□□□□□ -1
LIG3-204ENST00000585740 C7orf69Q9H7B7 122 aa8.83□□□□□ -1
LIG3-204ENST00000585740 KLF12Q9Y4X4 402 aa8.83□□□□□ -1
LIG3-204ENST00000585740 TRBV9A0A0B4J1U6 114 aa8.82□□□□□ -1
LIG3-204ENST00000585740 TRBV6-1A0A0K0K1D8 114 aa8.82□□□□□ -1
LIG3-204ENST00000585740 ZNF98A6NK75 572 aa8.82□□□□□ -1
LIG3-204ENST00000585740 RAB9AP51151 201 aa8.82□□□□□ -1
LIG3-204ENST00000585740 PDE6HQ13956 83 aa8.82□□□□□ -1
LIG3-204ENST00000585740 IBA57Q5T440 356 aaKnown RBP8.82□□□□□ -1
LIG3-204ENST00000585740 LINC01356Q8N9X3 169 aa8.82□□□□□ -1
LIG3-204ENST00000585740 CMTM2Q8TAZ6 248 aa8.82□□□□□ -1
LIG3-204ENST00000585740 EEF1AKMT3Q96AZ1 226 aa8.82□□□□□ -1
LIG3-204ENST00000585740 BEX4Q9NWD9 120 aaPredicted RBP8.82□□□□□ -1
LIG3-204ENST00000585740 RABAC1Q9UI14 185 aa8.82□□□□□ -1
LIG3-204ENST00000585740 PITPNC1Q9UKF7 332 aa8.82□□□□□ -1
LIG3-204ENST00000585740 V9GYV3 84 aa8.82□□□□□ -1
LIG3-204ENST00000585740 TRBV19A0A075B6N1 114 aa8.81□□□□□ -1
LIG3-204ENST00000585740 TRBV7-1A0A0A6YYK4 115 aa8.81□□□□□ -1
LIG3-204ENST00000585740 F8W735 103 aaPredicted RBP8.81□□□□□ -1
LIG3-204ENST00000585740 K7EQM0 130 aa8.81□□□□□ -1
LIG3-204ENST00000585740 BMPR1BO00238 502 aa8.81□□□□□ -1
LIG3-204ENST00000585740 GATCO43716 136 aaKnown RBP8.81□□□□□ -1
LIG3-204ENST00000585740 TCRAP04437 139 aa8.81□□□□□ -1
LIG3-204ENST00000585740 SMIM6P0DI80 62 aa8.81□□□□□ -1
LIG3-204ENST00000585740 RPL7P18124 248 aaKnown RBP8.81□□□□□ -1
LIG3-204ENST00000585740 OR5I1Q13606 314 aa8.81□□□□□ -1
LIG3-204ENST00000585740 ARL6IP6Q8N6S5 226 aa8.81□□□□□ -1
LIG3-204ENST00000585740 ZNF502Q8TBZ5 544 aa8.81□□□□□ -1
LIG3-204ENST00000585740 GPR82Q96P67 336 aa8.81□□□□□ -1
LIG3-204ENST00000585740 HIF1ANQ9NWT6 349 aa8.81□□□□□ -1
LIG3-204ENST00000585740 ZNF586Q9NXT0 402 aa8.81□□□□□ -1
LIG3-204ENST00000585740 TRAPPC1Q9Y5R8 145 aa8.81□□□□□ -1
LIG3-204ENST00000585740 SERTM2A0A1B0GWG4 89 aa8.8□□□□□ -1
LIG3-204ENST00000585740 A6NDX4 124 aa8.8□□□□□ -1
LIG3-204ENST00000585740 FAM223BA6NKX1 122 aa8.8□□□□□ -1
LIG3-204ENST00000585740 ZNF705GA8MUZ8 300 aaPredicted RBP8.8□□□□□ -1
LIG3-204ENST00000585740 H3BUA1 57 aa8.8□□□□□ -1
LIG3-204ENST00000585740 BRI3O95415 125 aa8.8□□□□□ -1
LIG3-204ENST00000585740 CTSGP08311 255 aa8.8□□□□□ -1
LIG3-204ENST00000585740 IGLC2P0DOY2 106 aa8.8□□□□□ -1
LIG3-204ENST00000585740 IGHV4-38-2P0DP08 117 aa8.8□□□□□ -1
LIG3-204ENST00000585740 S100A2P29034 98 aa8.8□□□□□ -1
LIG3-204ENST00000585740 MEOX2P50222 304 aa8.8□□□□□ -1
LIG3-204ENST00000585740 RPL15P61313 204 aaKnown RBP8.8□□□□□ -1
LIG3-204ENST00000585740 GNG5P63218 68 aa8.8□□□□□ -1
LIG3-204ENST00000585740 RHOGP84095 191 aa8.8□□□□□ -1
LIG3-204ENST00000585740 PSG9Q00887 426 aa8.8□□□□□ -1
LIG3-204ENST00000585740 USF2Q15853 346 aaPredicted RBP8.8□□□□□ -1
LIG3-204ENST00000585740 C15orf32Q32M92 178 aa8.8□□□□□ -1
LIG3-204ENST00000585740 LEMD1Q68G75 181 aa8.8□□□□□ -1
LIG3-204ENST00000585740 WDR73Q6P4I2 378 aa8.8□□□□□ -1
LIG3-204ENST00000585740 FAM223AQ8IWN6 122 aa8.8□□□□□ -1
LIG3-204ENST00000585740 LRRC75A-AS1Q8N1F1 130 aa8.8□□□□□ -1
LIG3-204ENST00000585740 PIFOQ8TCI5 191 aa8.8□□□□□ -1
LIG3-204ENST00000585740 GRAMD2BQ96HH9 432 aa8.8□□□□□ -1
LIG3-204ENST00000585740 ZNF492Q9P255 531 aa8.8□□□□□ -1
LIG3-204ENST00000585740 IGHV3OR16-10A0A075B7F0 116 aa8.79□□□□□ -1
LIG3-204ENST00000585740 TRAV41A0A0B4J266 112 aa8.79□□□□□ -1
LIG3-204ENST00000585740 OR2T8A6NH00 312 aa8.79□□□□□ -1
LIG3-204ENST00000585740 SLC17A3O00476 420 aa8.79□□□□□ -1
LIG3-204ENST00000585740 MRPS12O15235 138 aaKnown RBP8.79□□□□□ -1
LIG3-204ENST00000585740 ZNF253O75346 499 aa8.79□□□□□ -1
LIG3-204ENST00000585740 MT-ND6P03923 174 aa8.79□□□□□ -1
LIG3-204ENST00000585740 ATP5G2Q06055 141 aa8.79□□□□□ -1
LIG3-204ENST00000585740 LOXL1Q08397 574 aaPredicted RBP8.79□□□□□ -1
LIG3-204ENST00000585740 COA6Q5JTJ3 125 aaKnown RBP8.79□□□□□ -1
LIG3-204ENST00000585740 BRD3OSQ6XYD6 125 aa8.79□□□□□ -1
LIG3-204ENST00000585740 RNASE7Q9H1E1 156 aaKnown RBP8.79□□□□□ -1
LIG3-204ENST00000585740 AAMDCQ9H7C9 122 aa8.79□□□□□ -1
LIG3-204ENST00000585740 S4R3C0 116 aa8.79□□□□□ -1
LIG3-204ENST00000585740 TRAV34A0A0B4J273 112 aa8.78□□□□□ -1
LIG3-204ENST00000585740 SMIM27A0A1W2PRY6 76 aa8.78□□□□□ -1
LIG3-204ENST00000585740 IZUMO1RA6ND01 250 aa8.78□□□□□ -1
LIG3-204ENST00000585740 FBLL1A6NHQ2 334 aaKnown RBP8.78□□□□□ -1
LIG3-204ENST00000585740 LTAP01374 205 aa8.78□□□□□ -1
LIG3-204ENST00000585740 IGF1P05019 195 aa8.78□□□□□ -1
LIG3-204ENST00000585740 CSN1S1P47710 185 aa8.78□□□□□ -1
LIG3-204ENST00000585740 RELQ04864 619 aaPredicted RBP8.78□□□□□ -1
LIG3-204ENST00000585740 C19orf54Q5BKX5 351 aa8.78□□□□□ -1
LIG3-204ENST00000585740 RASL11AQ6T310 242 aa8.78□□□□□ -1
LIG3-204ENST00000585740 TMEM219Q86XT9 240 aa8.78□□□□□ -1
LIG3-204ENST00000585740 OR8I2Q8N0Y5 310 aa8.78□□□□□ -1
LIG3-204ENST00000585740 HIST3H2BBQ8N257 126 aa8.78□□□□□ -1
LIG3-204ENST00000585740 TMEM75Q8N9X5 138 aa8.78□□□□□ -1
LIG3-204ENST00000585740 ZNF414Q96IQ9 312 aa8.78□□□□□ -1
LIG3-204ENST00000585740 LINC00479Q96M42 142 aa8.78□□□□□ -1
LIG3-204ENST00000585740 MLST8Q9BVC4 326 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms