RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 TET2Q6N021 2002 aaPredicted RBP3.46□□□□□ -1.86
SS18-223ENST00000583595 TRAV8-4A0A0B4J246 113 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 KIR2DS1A0A191URI9 304 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 A0A1W2PPM0 123 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 FAM24AA6NFZ4 105 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 EPOPA6NHQ4 379 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 SYNGR1O43759 233 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 FOXH1O75593 365 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 P01737 135 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 SPINK8P0C7L1 97 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 HIST1H1EP10412 219 aaKnown RBP3.46□□□□□ -1.86
SS18-223ENST00000583595 SLC25A6P12236 298 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 HIST1H1DP16402 221 aaKnown RBP3.46□□□□□ -1.86
SS18-223ENST00000583595 HIST1H1CP16403 213 aaKnown RBP3.46□□□□□ -1.86
SS18-223ENST00000583595 GATA2P23769 480 aaPredicted RBP3.46□□□□□ -1.86
SS18-223ENST00000583595 HTR1DP28221 377 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 DRD3P35462 400 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 DYNLT3P51808 116 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 ZNF133P52736 654 aaPredicted RBP3.46□□□□□ -1.86
SS18-223ENST00000583595 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 HERVK_113P61574 105 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 UBE2G1P62253 170 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 SERF2P84101 59 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 CD164Q04900 197 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 KLRD1Q13241 179 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 TIMM23BQ5SRD1 257 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 AGTRAPQ6RW13 159 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 TMEM86AQ8N2M4 240 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 DEFB123Q8N688 67 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 OR10AC1Q8NH08 325 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 SCGB1C1Q8TD33 95 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 TSKUQ8WUA8 353 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 SDF2Q99470 211 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 NRTNQ99748 197 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 SFXN3Q9BWM7 321 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 GFRA4Q9GZZ7 299 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 TMEM126AQ9H061 195 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 OR2D2Q9H210 308 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 NAA60Q9H7X0 242 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 SPANXB1Q9NS25 103 aaPredicted RBP3.46□□□□□ -1.86
SS18-223ENST00000583595 MED29Q9NX70 200 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 IL36BQ9NZH7 164 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 TAAR3PQ9P1P4 343 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 CEP290O15078 2479 aa3.46□□□□□ -1.86
SS18-223ENST00000583595 SCN2AQ99250 2005 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 IGKV3D-15A0A087WSY6 115 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 TRAV27A0A087WT01 109 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 A0A087WX48 190 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 TMEM14DPA8MWL7 114 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 H3BUT2 72 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 ISLRO14498 428 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 ALOX5APP20292 161 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 TCTAP57738 103 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 QRFPP83859 136 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 ZNF90Q03938 601 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 MEF2CQ06413 473 aaPredicted RBP3.45□□□□□ -1.86
SS18-223ENST00000583595 RBMY1FQ15415 496 aaKnown RBP3.45□□□□□ -1.86
SS18-223ENST00000583595 LINC01590Q5TEZ4 76 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 TCF23Q7RTU1 214 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 LYPD6Q86Y78 171 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 BPIFA4PQ86YQ2 179 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 ATOH7Q8N100 152 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 GAPTQ8N292 157 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 OR2M3Q8NG83 312 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 OR5C1Q8NGR4 320 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 OR10G6Q8NH81 332 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 ATP6V0E2Q8NHE4 81 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 KLK6Q92876 244 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 LSM10Q969L4 123 aaKnown RBP3.45□□□□□ -1.86
SS18-223ENST00000583595 APOBEC3DQ96AK3 386 aaPredicted RBP3.45□□□□□ -1.86
SS18-223ENST00000583595 OR2A5Q96R48 311 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 TXNDC17Q9BRA2 123 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 PECRQ9BY49 303 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 TMEM191AQ9H0A3 160 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 TMEM133Q9H2Q1 129 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 PRO3102Q9H379 93 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 RPRMQ9NS64 109 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 SLC39A9Q9NUM3 307 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 TAS2R4Q9NYW5 299 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 ANXA10Q9UJ72 324 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 TIMM9Q9Y5J7 89 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 PLXNA1Q9UIW2 1896 aa3.45□□□□□ -1.86
SS18-223ENST00000583595 GREB1Q4ZG55 1949 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 TICRRQ7Z2Z1 1910 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 CCDC88CQ9P219 2028 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 IGLV3-16A0A075B6K0 115 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 IGKV1-27A0A075B6S5 117 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 PIGBOS1A0A0B4J2F0 54 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 IGHV1-69DA0A0B4J2H0 117 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 CENPVL3A0A0U1RRI6 287 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 CTXND1A0A1B0GTU2 59 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 SMIM9A6NGZ8 99 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 OR4C46A6NHA9 309 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 F2Z2F3 143 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 M0R2Z0 102 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 RER1O15258 196 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 SLC31A1O15431 190 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 HLA-DQA1P01909 254 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 DBIP07108 87 aaKnown RBP3.44□□□□□ -1.86
SS18-223ENST00000583595 COX8AP10176 69 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms