RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 SIGLEC15Q6ZMC9 328 aa4.68□□□□□ -1.66
RTTN-209ENST00000583043 KIR2DL5AQ8N109 375 aa4.68□□□□□ -1.66
RTTN-209ENST00000583043 PCDH15Q96QU1 1955 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 TRBV20OR9-2A0A075B6H5 130 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 A0A1W2PRD5 423 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 A0A1W2PRF3 423 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 A0A1W2PRM7 423 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 SRRM4A7MD48 611 aaKnown RBP4.67□□□□□ -1.66
RTTN-209ENST00000583043 NDUFA4O00483 81 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 IGLV2-23P01705 113 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 FOXE3Q13461 319 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 LY6G5BQ8NDX9 201 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 ALKBH7Q9BT30 221 aaPredicted RBP4.67□□□□□ -1.66
RTTN-209ENST00000583043 F5H697 171 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 GNG5P63218 68 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 TP53BP1Q12888 1972 aaPredicted RBP4.67□□□□□ -1.66
RTTN-209ENST00000583043 TNRC6AQ8NDV7 1962 aaKnown RBP4.67□□□□□ -1.66
RTTN-209ENST00000583043 OR11H12B2RN74 326 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 SIVA1O15304 175 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 GP9P14770 177 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 GAGE1Q13065 139 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 FAM53AQ6NSI3 398 aaPredicted RBP4.67□□□□□ -1.66
RTTN-209ENST00000583043 BCL6BQ8N143 479 aaPredicted RBP4.67□□□□□ -1.66
RTTN-209ENST00000583043 OR11H1Q8NG94 326 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 OR11H2Q8NH07 326 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 PGPEP1LA6NFU8 196 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.67□□□□□ -1.66
RTTN-209ENST00000583043 C15orf32Q32M92 178 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 GFI1BQ5VTD9 330 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 SP5Q6BEB4 398 aaPredicted RBP4.67□□□□□ -1.66
RTTN-209ENST00000583043 OR5A1Q8NGJ0 315 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 ORAOV1Q8WV07 137 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 RAXQ9Y2V3 346 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 SYS1-DBNDD2H3BUS1 97 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 I3L2K1 104 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 C3orf79P0CE67 100 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 WT1P19544 449 aaPredicted RBP4.67□□□□□ -1.66
RTTN-209ENST00000583043 BRWD1-AS2P59051 145 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 FAM104BQ5XKR9 115 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 FAM167A-AS1Q96KT0 104 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 CTSZQ9UBR2 303 aa4.67□□□□□ -1.66
RTTN-209ENST00000583043 C7orf71A4D174 169 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 MED14OSP0DP75 135 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 ZNF664Q8N3J9 261 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 A0A087X0K7 114 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 NUDT3O95989 172 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 ZNF491Q8N8L2 437 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 C14orf144Q96I85 54 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 YAE1D1Q9NRH1 226 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 DPM2O94777 84 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 PLNP26678 52 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 FOXA3P55318 350 aaPredicted RBP4.66□□□□□ -1.66
RTTN-209ENST00000583043 SRSF6Q13247 344 aaKnown RBP4.66□□□□□ -1.66
RTTN-209ENST00000583043 EBI3Q14213 229 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 CLEC19AQ6UXS0 136 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 IFI27L1Q96BM0 104 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 FNDC4Q9H6D8 234 aaPredicted RBP4.66□□□□□ -1.66
RTTN-209ENST00000583043 PHF3Q92576 2039 aaKnown RBP4.66□□□□□ -1.66
RTTN-209ENST00000583043 WI2-2373I1.2A0A1W2PRP0 233 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 LGALS9BQ3B8N2 356 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 LGALS9CQ6DKI2 356 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 TMEM256Q8N2U0 113 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 C7orf69Q9H7B7 122 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 IGLV11-55A0A075B6I3 123 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 IGHV1-69DA0A0B4J2H0 117 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 GAGE10A6NGK3 116 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 A6NNC1 897 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 SH2D1AO60880 128 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 IGHV1-69P01742 117 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 LCN12Q6JVE5 192 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 DYNLRB2Q8TF09 96 aa4.66□□□□□ -1.66
RTTN-209ENST00000583043 FAM186AA6NE01 2351 aa4.65□□□□□ -1.66
RTTN-209ENST00000583043 TMSB15BA0A087X1C1 80 aa4.65□□□□□ -1.66
RTTN-209ENST00000583043 PROP1O75360 226 aa4.65□□□□□ -1.66
RTTN-209ENST00000583043 APELAP0DMC3 54 aa4.65□□□□□ -1.66
RTTN-209ENST00000583043 DEFB121Q5J5C9 76 aa4.65□□□□□ -1.66
RTTN-209ENST00000583043 UNQ6494/PRO21346Q6UXR6 183 aa4.65□□□□□ -1.66
RTTN-209ENST00000583043 SMIM13P0DJ93 91 aa4.65□□□□□ -1.66
RTTN-209ENST00000583043 C3orf56Q8N813 242 aa4.65□□□□□ -1.66
RTTN-209ENST00000583043 PRR25Q96S07 402 aa4.65□□□□□ -1.66
RTTN-209ENST00000583043 TAL2Q16559 108 aa4.65□□□□□ -1.67
RTTN-209ENST00000583043 AMN1Q8IY45 258 aa4.65□□□□□ -1.67
RTTN-209ENST00000583043 JMJD8Q96S16 334 aa4.65□□□□□ -1.67
RTTN-209ENST00000583043 DLX1P56177 255 aa4.65□□□□□ -1.67
RTTN-209ENST00000583043 LAGE3Q14657 143 aa4.65□□□□□ -1.67
RTTN-209ENST00000583043 SCGB1D4Q6XE38 83 aa4.65□□□□□ -1.67
RTTN-209ENST00000583043 C20orf78Q9BR46 151 aa4.65□□□□□ -1.67
RTTN-209ENST00000583043 VPS25Q9BRG1 176 aa4.65□□□□□ -1.67
RTTN-209ENST00000583043 ODF3BA8MYP8 253 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 CD5LO43866 347 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 CRYGBP07316 175 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 C16orf54Q6UWD8 224 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 DAZ1Q9NQZ3 744 aaKnown RBP4.64□□□□□ -1.67
RTTN-209ENST00000583043 CYSLTR1Q9Y271 337 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 A0A1B0GV90 55 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 K7EN84 100 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 LYZL1Q6UWQ5 148 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 Q8N8P6 123 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 POLR3KQ9Y2Y1 108 aaPredicted RBP4.64□□□□□ -1.67
RTTN-209ENST00000583043 MGPP08493 103 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms