RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 GPX4P36969 197 aaPredicted RBP8.75□□□□□ -1.01
SS18-219ENST00000581570 RHOBP62745 196 aa8.75□□□□□ -1.01
SS18-219ENST00000581570 ZNF493Q6ZR52 646 aa8.75□□□□□ -1.01
SS18-219ENST00000581570 LGI3Q8N145 548 aa8.75□□□□□ -1.01
SS18-219ENST00000581570 TERB2Q8NHR7 220 aa8.75□□□□□ -1.01
SS18-219ENST00000581570 PPP1R14DQ9NXH3 145 aa8.75□□□□□ -1.01
SS18-219ENST00000581570 ZNF98A6NK75 572 aa8.74□□□□□ -1.01
SS18-219ENST00000581570 H3BNG1 76 aa8.74□□□□□ -1.01
SS18-219ENST00000581570 TNFAIP8O95379 198 aa8.74□□□□□ -1.01
SS18-219ENST00000581570 HOXA5P20719 270 aa8.74□□□□□ -1.01
SS18-219ENST00000581570 NEDD8Q15843 81 aa8.74□□□□□ -1.01
SS18-219ENST00000581570 SCGB2B2Q4G0G5 96 aa8.74□□□□□ -1.01
SS18-219ENST00000581570 TMEM268Q5VZI3 342 aa8.74□□□□□ -1.01
SS18-219ENST00000581570 Q6ZSN1 163 aa8.74□□□□□ -1.01
SS18-219ENST00000581570 RNF182Q8N6D2 247 aa8.74□□□□□ -1.01
SS18-219ENST00000581570 MARCH1Q8TCQ1 289 aa8.74□□□□□ -1.01
SS18-219ENST00000581570 TRGV9Q99603 122 aa8.74□□□□□ -1.01
SS18-219ENST00000581570 TRAV8-2A0A0B4J237 113 aa8.73□□□□□ -1.01
SS18-219ENST00000581570 SULT1A3P0DMM9 295 aa8.73□□□□□ -1.01
SS18-219ENST00000581570 SULT1A4P0DMN0 295 aa8.73□□□□□ -1.01
SS18-219ENST00000581570 HIST1H1AQ02539 215 aaPredicted RBP8.73□□□□□ -1.01
SS18-219ENST00000581570 FGL1Q08830 312 aa8.73□□□□□ -1.01
SS18-219ENST00000581570 ZNF738Q8NE65 137 aa8.73□□□□□ -1.01
SS18-219ENST00000581570 OR4D5Q8NGN0 318 aa8.73□□□□□ -1.01
SS18-219ENST00000581570 OR1B1Q8NGR6 318 aa8.73□□□□□ -1.01
SS18-219ENST00000581570 RNASE8Q8TDE3 154 aaKnown RBP8.73□□□□□ -1.01
SS18-219ENST00000581570 DTD1Q8TEA8 209 aa8.73□□□□□ -1.01
SS18-219ENST00000581570 TMEM263Q8WUH6 116 aaKnown RBP8.73□□□□□ -1.01
SS18-219ENST00000581570 NAA60Q9H7X0 242 aa8.73□□□□□ -1.01
SS18-219ENST00000581570 GAGE12BA1L429 117 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 SIVA1O15304 175 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 GAGE7O76087 117 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 CFDP00746 253 aaPredicted RBP8.72□□□□□ -1.01
SS18-219ENST00000581570 GAGE12FP0CL80 117 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 GAGE12GP0CL81 117 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 GAGE12IP0CL82 117 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 TBPP20226 339 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 ATP5IP56385 69 aaPredicted RBP8.72□□□□□ -1.01
SS18-219ENST00000581570 LSM3P62310 102 aaKnown RBP8.72□□□□□ -1.01
SS18-219ENST00000581570 GGNBP1Q5YKI7 109 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 LINC00612Q8N6U2 182 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 OR4D10Q8NGI6 311 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 GPR82Q96P67 336 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 RTBDNQ9BSG5 229 aaPredicted RBP8.72□□□□□ -1.01
SS18-219ENST00000581570 RBKSQ9H477 322 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 SLC45A2Q9UMX9 530 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 C14orf166Q9Y224 244 aaKnown RBP8.72□□□□□ -1.01
SS18-219ENST00000581570 TNFRSF18Q9Y5U5 241 aa8.72□□□□□ -1.01
SS18-219ENST00000581570 A0A087WTM6 91 aa8.71□□□□□ -1.02
SS18-219ENST00000581570 RLN2P04090 185 aa8.71□□□□□ -1.02
SS18-219ENST00000581570 DNAH10OSP0CZ25 163 aa8.71□□□□□ -1.02
SS18-219ENST00000581570 GCSHP23434 173 aa8.71□□□□□ -1.02
SS18-219ENST00000581570 HAMPP81172 84 aa8.71□□□□□ -1.02
SS18-219ENST00000581570 CCDC28AQ8IWP9 274 aa8.71□□□□□ -1.02
SS18-219ENST00000581570 OR8A1Q8NGG7 326 aa8.71□□□□□ -1.02
SS18-219ENST00000581570 OR52I2Q8NH67 350 aa8.71□□□□□ -1.02
SS18-219ENST00000581570 HSPB7Q9UBY9 170 aa8.71□□□□□ -1.02
SS18-219ENST00000581570 TMEM56-RWDD3S4R434 201 aa8.71□□□□□ -1.02
SS18-219ENST00000581570 IGKV1OR2-108A0A075B7D4 117 aa8.7□□□□□ -1.02
SS18-219ENST00000581570 A0A096LPF7 62 aa8.7□□□□□ -1.02
SS18-219ENST00000581570 H7BYZ3 331 aa8.7□□□□□ -1.02
SS18-219ENST00000581570 HPGDSO60760 199 aa8.7□□□□□ -1.02
SS18-219ENST00000581570 RAB3DO95716 219 aa8.7□□□□□ -1.02
SS18-219ENST00000581570 ORM2P19652 201 aa8.7□□□□□ -1.02
SS18-219ENST00000581570 S100A7P31151 101 aa8.7□□□□□ -1.02
SS18-219ENST00000581570 CDKN1BP46527 198 aa8.7□□□□□ -1.02
SS18-219ENST00000581570 NFE4Q86UQ8 179 aa8.7□□□□□ -1.02
SS18-219ENST00000581570 THAP8Q8NA92 274 aa8.7□□□□□ -1.02
SS18-219ENST00000581570 MTFP1Q9UDX5 166 aa8.7□□□□□ -1.02
SS18-219ENST00000581570 CRYM-AS1A6NIL9 109 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 FAM25AB3EWG3 89 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 FAM25CB3EWG5 89 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 FAM25GB3EWG6 89 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 CCR6P51684 374 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 TAS2R19P59542 299 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 SMCO1Q147U7 214 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 TMEM229BQ8NBD8 167 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 IL22RA2Q969J5 263 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 VSIG2Q96IQ7 327 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 TMEM147Q9BVK8 224 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 UBR4Q5T4S7 5183 aa8.69□□□□□ -1.02
SS18-219ENST00000581570 SRRM2Q9UQ35 2752 aaKnown RBP8.69□□□□□ -1.02
SS18-219ENST00000581570 SNURFLB1AK76 121 aa8.68□□□□□ -1.02
SS18-219ENST00000581570 NXPH4O95158 308 aa8.68□□□□□ -1.02
SS18-219ENST00000581570 PRB4P10163 310 aaPredicted RBP8.68□□□□□ -1.02
SS18-219ENST00000581570 GATA2P23769 480 aaPredicted RBP8.68□□□□□ -1.02
SS18-219ENST00000581570 RAB11AP62491 216 aa8.68□□□□□ -1.02
SS18-219ENST00000581570 PSG3Q16557 428 aa8.68□□□□□ -1.02
SS18-219ENST00000581570 GPR107Q5VW38 600 aa8.68□□□□□ -1.02
SS18-219ENST00000581570 STEAP1BQ6NZ63 245 aa8.68□□□□□ -1.02
SS18-219ENST00000581570 TMED4Q7Z7H5 227 aa8.68□□□□□ -1.02
SS18-219ENST00000581570 BPIFCQ8NFQ6 507 aa8.68□□□□□ -1.02
SS18-219ENST00000581570 C20orf144Q9BQM9 153 aa8.68□□□□□ -1.02
SS18-219ENST00000581570 TMPRSS5Q9H3S3 457 aa8.68□□□□□ -1.02
SS18-219ENST00000581570 Q9H521 79 aa8.68□□□□□ -1.02
SS18-219ENST00000581570 PAIP2BQ9ULR5 123 aaKnown RBP8.68□□□□□ -1.02
SS18-219ENST00000581570 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
SS18-219ENST00000581570 CXCL3P19876 107 aa8.67□□□□□ -1.02
SS18-219ENST00000581570 SURF2Q15527 256 aaPredicted RBP8.67□□□□□ -1.02
SS18-219ENST00000581570 SERTAD4-AS1Q5TG53 156 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms