RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 SCRT1Q9BWW7 348 aa10.55□□□□□ -0.72
IFT20-211ENST00000580991 IGHV3OR16-13A0A075B7E8 117 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 IGHV3-74A0A0B4J1X5 117 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 TRAV3A0A0B4J244 114 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 UPK2O00526 184 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 NUPL2O15504 423 aaKnown RBP10.54□□□□□ -0.72
IFT20-211ENST00000580991 ATG12O94817 140 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 LPAR6P43657 344 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 WT1-ASQ06250 92 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 CATR1Q13166 79 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 Q6ZRG5 221 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 TRPT1Q86TN4 253 aaKnown RBP10.54□□□□□ -0.72
IFT20-211ENST00000580991 GPR146Q96CH1 333 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 RAB40CQ96S21 281 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 MS4A6AQ9H2W1 248 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 WFDC1Q9HC57 220 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 TREM1Q9NP99 234 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 TMEM14BQ9NUH8 114 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 LRP1BQ9NZR2 4599 aa10.54□□□□□ -0.72
IFT20-211ENST00000580991 APOBP04114 4563 aaKnown RBP10.54□□□□□ -0.72
IFT20-211ENST00000580991 TRAV2A0A0B4J234 112 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 IGSF23A1L1A6 192 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 FAM24AA6NFZ4 105 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 K7EIM0 57 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 RBFOX2O43251 390 aaKnown RBP eCLIP10.53□□□□□ -0.72
IFT20-211ENST00000580991 AKR1C2P52895 323 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 NHLH2Q02577 135 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 POU2AF1Q16633 256 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 RNF212Q495C1 297 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 STX12Q86Y82 276 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 SVBPQ8N300 66 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 TMEM252Q8N6L7 170 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 ZNF414Q96IQ9 312 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 GPHA2Q96T91 129 aa10.53□□□□□ -0.72
IFT20-211ENST00000580991 F11RQ9Y624 299 aaKnown RBP10.53□□□□□ -0.72
IFT20-211ENST00000580991 FAM90A26D6RGX4 464 aa10.52□□□□□ -0.73
IFT20-211ENST00000580991 NQO2P16083 231 aa10.52□□□□□ -0.73
IFT20-211ENST00000580991 CAMLGP49069 296 aa10.52□□□□□ -0.73
IFT20-211ENST00000580991 RPL11P62913 178 aaKnown RBP10.52□□□□□ -0.73
IFT20-211ENST00000580991 TNP2Q05952 138 aa10.52□□□□□ -0.73
IFT20-211ENST00000580991 FAM24BQ8N5W8 94 aa10.52□□□□□ -0.73
IFT20-211ENST00000580991 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.52□□□□□ -0.73
IFT20-211ENST00000580991 CSNK1G2-AS1Q8NCQ2 148 aa10.52□□□□□ -0.73
IFT20-211ENST00000580991 GNPNAT1Q96EK6 184 aaPredicted RBP10.52□□□□□ -0.73
IFT20-211ENST00000580991 FAM210BQ96KR6 192 aa10.52□□□□□ -0.73
IFT20-211ENST00000580991 MAGT1Q9H0U3 335 aa10.52□□□□□ -0.73
IFT20-211ENST00000580991 CARHSP1Q9Y2V2 147 aaKnown RBP10.52□□□□□ -0.73
IFT20-211ENST00000580991 NACAE9PAV3 2078 aa10.52□□□□□ -0.73
IFT20-211ENST00000580991 UMAD1C9J7I0 102 aa10.51□□□□□ -0.73
IFT20-211ENST00000580991 F8W036 122 aa10.51□□□□□ -0.73
IFT20-211ENST00000580991 HPRT1P00492 218 aa10.51□□□□□ -0.73
IFT20-211ENST00000580991 BTN1A1Q13410 526 aa10.51□□□□□ -0.73
IFT20-211ENST00000580991 C10orf91Q5T1B1 145 aa10.51□□□□□ -0.73
IFT20-211ENST00000580991 LYPD6BQ8NI32 183 aa10.51□□□□□ -0.73
IFT20-211ENST00000580991 SEC11CQ9BY50 192 aa10.51□□□□□ -0.73
IFT20-211ENST00000580991 NKX6-2Q9C056 277 aaPredicted RBP10.51□□□□□ -0.73
IFT20-211ENST00000580991 TMEM140Q9NV12 185 aa10.51□□□□□ -0.73
IFT20-211ENST00000580991 CLEC5AQ9NY25 188 aa10.51□□□□□ -0.73
IFT20-211ENST00000580991 CACNG5Q9UF02 275 aa10.51□□□□□ -0.73
IFT20-211ENST00000580991 TEX50A0A1B0GTY4 177 aa10.5□□□□□ -0.73
IFT20-211ENST00000580991 TAS2R30P59541 319 aa10.5□□□□□ -0.73
IFT20-211ENST00000580991 CLINT1Q14677 625 aa10.5□□□□□ -0.73
IFT20-211ENST00000580991 HSD17B11Q8NBQ5 300 aa10.5□□□□□ -0.73
IFT20-211ENST00000580991 OR5C1Q8NGR4 320 aa10.5□□□□□ -0.73
IFT20-211ENST00000580991 OR1L8Q8NGR8 309 aa10.5□□□□□ -0.73
IFT20-211ENST00000580991 ATP5SQ99766 215 aa10.5□□□□□ -0.73
IFT20-211ENST00000580991 VSIRQ9H7M9 311 aa10.5□□□□□ -0.73
IFT20-211ENST00000580991 UQCC1Q9NVA1 299 aa10.5□□□□□ -0.73
IFT20-211ENST00000580991 CACFD1Q9UGQ2 172 aa10.5□□□□□ -0.73
IFT20-211ENST00000580991 RABAC1Q9UI14 185 aa10.5□□□□□ -0.73
IFT20-211ENST00000580991 SRRM2Q9UQ35 2752 aaKnown RBP10.5□□□□□ -0.73
IFT20-211ENST00000580991 A0A0G2JRQ6 117 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 SYNGR2O43760 224 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 SNAPINO95295 136 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 IFNA5P01569 189 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 IGKV1-39P01597 117 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 IGKV1-5P01602 117 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 IGKV1D-39P04432 117 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 SULT1A1P50225 295 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 PEA15Q15121 130 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 LILRB2Q8N423 598 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 TXN2Q99757 166 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 PBDC1Q9BVG4 233 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 HINT2Q9BX68 163 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 NDUFA4L2Q9NRX3 87 aa10.49□□□□□ -0.73
IFT20-211ENST00000580991 NXPH3O95157 252 aa10.48□□□□□ -0.73
IFT20-211ENST00000580991 APOHP02749 345 aaPredicted RBP10.48□□□□□ -0.73
IFT20-211ENST00000580991 ATP6V0CP27449 155 aa10.48□□□□□ -0.73
IFT20-211ENST00000580991 MFAP4P55083 255 aa10.48□□□□□ -0.73
IFT20-211ENST00000580991 PAX9P55771 341 aa10.48□□□□□ -0.73
IFT20-211ENST00000580991 AKR1C1Q04828 323 aa10.48□□□□□ -0.73
IFT20-211ENST00000580991 DPPA3Q6W0C5 159 aa10.48□□□□□ -0.73
IFT20-211ENST00000580991 TMEM182Q6ZP80 229 aaPredicted RBP10.48□□□□□ -0.73
IFT20-211ENST00000580991 OR2G3Q8NGZ4 309 aa10.48□□□□□ -0.73
IFT20-211ENST00000580991 GRAMD2BQ96HH9 432 aa10.48□□□□□ -0.73
IFT20-211ENST00000580991 SH3BGRL3Q9H299 93 aa10.48□□□□□ -0.73
IFT20-211ENST00000580991 PSENENQ9NZ42 101 aa10.48□□□□□ -0.73
IFT20-211ENST00000580991 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
IFT20-211ENST00000580991 CST7O76096 145 aa10.47□□□□□ -0.73
IFT20-211ENST00000580991 TMEM50AO95807 157 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms