RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 MRPL27Q9P0M9 148 aaKnown RBP4.82□□□□□ -1.64
PTPRM-213ENST00000580949 PITPNC1Q9UKF7 332 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 VPREB3Q9UKI3 123 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 MYO9AB2RTY4 2548 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 PGPEP1LA6NFU8 196 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 OR2T8A6NH00 312 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 FAM74A7A6NL05 159 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 GNG7O60262 68 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 BRI3O95415 125 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 TOMM40O96008 361 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 IFNA1P01562 189 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 CLEC3BP05452 202 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 SNRPCP09234 159 aaKnown RBP4.81□□□□□ -1.64
PTPRM-213ENST00000580949 OR10J4P0C629 311 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 PYYP10082 97 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 CEBPGP53567 150 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 YPEL3P61236 119 aaPredicted RBP4.81□□□□□ -1.64
PTPRM-213ENST00000580949 LYZP61626 148 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 MEF2BQ02080 365 aaPredicted RBP4.81□□□□□ -1.64
PTPRM-213ENST00000580949 ATP5G2Q06055 141 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 KIAA0141Q14154 515 aaPredicted RBP4.81□□□□□ -1.64
PTPRM-213ENST00000580949 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 Q56UQ5 140 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 CST9LP1Q5W188 147 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 LEMD1Q68G75 181 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 C10orf99Q6UWK7 81 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 LINC00305Q7Z4B0 112 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 OR5AU1Q8NGC0 362 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 OR1L4Q8NGR5 311 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 OR4F5Q8NH21 305 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 FXYD5Q96DB9 178 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 DUX5Q96PT3 197 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 OR4F4Q96R69 305 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 RNF2Q99496 336 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 TXN2Q99757 166 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 SMR3AQ99954 134 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 MRPL32Q9BYC8 188 aaKnown RBP4.81□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF702PQ9H963 129 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 MANBALQ9NQG1 85 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 THYN1Q9P016 225 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF580Q9UK33 172 aa4.81□□□□□ -1.64
PTPRM-213ENST00000580949 TRAV30A0A087WSZ9 112 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 IGHV3-35A0A0C4DH35 117 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 C11orf94C9JXX5 98 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 H3BQ15 152 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 DNASE2O00115 360 aaPredicted RBP4.8□□□□□ -1.64
PTPRM-213ENST00000580949 AP4M1O00189 453 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 OR7C2O60412 319 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 TRGV3P03979 118 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 GPR183P32249 361 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 SRP14P37108 136 aaKnown RBP4.8□□□□□ -1.64
PTPRM-213ENST00000580949 AKR1C3P42330 323 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 BTN1A1Q13410 526 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 USF2Q15853 346 aaPredicted RBP4.8□□□□□ -1.64
PTPRM-213ENST00000580949 FAM74A3Q4VXF1 159 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF343Q6P1L6 599 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 CLEC19AQ6UXS0 136 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 PQLC2Q6ZP29 291 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF329Q86UD4 541 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 SVBPQ8N300 66 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 PFDN5Q99471 154 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 SHANK2-AS3Q9BTD1 123 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 PAXXQ9BUH6 204 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 C20orf24Q9BUV8 137 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 SLC25A39Q9BZJ4 359 aaPredicted RBP4.8□□□□□ -1.64
PTPRM-213ENST00000580949 OR51M1Q9H341 326 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 HIGD1AQ9Y241 93 aa4.8□□□□□ -1.64
PTPRM-213ENST00000580949 PUS1Q9Y606 427 aaKnown RBP eCLIP4.8□□□□□ -1.64
PTPRM-213ENST00000580949 AKAP9Q99996 3911 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 ANK3Q12955 4377 aaKnown RBP4.79□□□□□ -1.64
PTPRM-213ENST00000580949 IGHV3OR16-8A0A075B7F1 116 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 CLPSL1A2RUU4 121 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 C7orf77A4D0Y5 90 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 FAM223BA6NKX1 122 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 GGTLC3B5MD39 225 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 PPP5D1E7EU14 171 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 TMEM250H0YL14 139 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 H3BTX0 84 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 MRPS12O15235 138 aaKnown RBP4.79□□□□□ -1.64
PTPRM-213ENST00000580949 NUPL2O15504 423 aaKnown RBP4.79□□□□□ -1.64
PTPRM-213ENST00000580949 NDUFS6O75380 124 aaKnown RBP4.79□□□□□ -1.64
PTPRM-213ENST00000580949 NDUFB4O95168 129 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 OR2C1O95371 312 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 LY6G6DO95868 133 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 TRBV12-3P01733 135 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 IGHG4P01861 327 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 IL4P05112 153 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 FABP1P07148 127 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 GP9P14770 177 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 TAGLN2P37802 199 aaKnown RBP4.79□□□□□ -1.64
PTPRM-213ENST00000580949 MYCNOSP40205 109 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 RAB9AP51151 201 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 TAS2R45P59539 299 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 UBE2L3P68036 154 aaKnown RBP4.79□□□□□ -1.64
PTPRM-213ENST00000580949 TOMM20LQ6UXN7 152 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 FAM223AQ8IWN6 122 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 Q8N2B8 174 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 Q8WTZ3 238 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 EEF1AKMT3Q96AZ1 226 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 RPUSD4Q96CM3 377 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms