RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 PRCDQ00LT1 54 aa4.26□□□□□ -1.73
NF1-219ENST00000579081 KLRD1Q13241 179 aa4.26□□□□□ -1.73
NF1-219ENST00000579081 KLF17Q5JT82 389 aaPredicted RBP4.26□□□□□ -1.73
NF1-219ENST00000579081 SIGLEC15Q6ZMC9 328 aa4.26□□□□□ -1.73
NF1-219ENST00000579081 TNS1Q9HBL0 1735 aaKnown RBP4.26□□□□□ -1.73
NF1-219ENST00000579081 ERVH48-1M5A8F1 160 aa4.26□□□□□ -1.73
NF1-219ENST00000579081 LEPROTO15243 131 aa4.26□□□□□ -1.73
NF1-219ENST00000579081 C1QTNF4Q9BXJ3 329 aa4.26□□□□□ -1.73
NF1-219ENST00000579081 TRAV41A0A0B4J266 112 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 LINC01619G3V211 115 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 SP5Q6BEB4 398 aaPredicted RBP4.25□□□□□ -1.73
NF1-219ENST00000579081 LYPD6BQ8NI32 183 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 IFI27L1Q96BM0 104 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 TRAV40A0A0B4J280 105 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 NPIPB5A8MRT5 1133 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST1H2BKO60814 126 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST1H2BJP06899 126 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST1H2BOP23527 126 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST1H2BBP33778 126 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST1H2BDP58876 126 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST1H2BCP62807 126 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST2H2BEQ16778 126 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.25□□□□□ -1.73
NF1-219ENST00000579081 C2orf82Q6UX34 121 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 DMRTC2Q8IXT2 367 aaPredicted RBP4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST3H2BBQ8N257 126 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST1H2BHQ93079 126 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST1H2BNQ99877 126 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIST1H2BMQ99879 126 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 IGHV2OR16-5A0A0B4J2B6 119 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 A0A1W2PPI3 338 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 HIGD1CA8MV81 97 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 NKAPP1Q8N9T2 125 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 RNF185Q96GF1 192 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 TMEM141Q96I45 108 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 C5orf66Q9H5L9 145 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 EPDR1Q9UM22 224 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 WNK1Q9H4A3 2382 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 MYLKQ15746 1914 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 ZNF561-AS1K7EIQ3 104 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 C9orf47Q6ZRZ4 202 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 RNF114Q9Y508 228 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 A0A0J9YXY3 114 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 CLPSP04118 112 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 CCL3L1P16619 93 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 COL5A3P25940 1745 aaPredicted RBP4.25□□□□□ -1.73
NF1-219ENST00000579081 SLC25A45Q8N413 288 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 PRSS47A8MTI9 375 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 CXCL5P42830 114 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 ATG2BQ96BY7 2078 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 ANKRD39Q53RE8 183 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 TSKUQ8WUA8 353 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 LINC00527Q9UJ94 153 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 SCN10AQ9Y5Y9 1956 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 FRMPD3Q5JV73 1810 aa4.25□□□□□ -1.73
NF1-219ENST00000579081 IGHV2-70DA0A0C4DH43 119 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 MYMXA0A1B0GTQ4 84 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 H3BT86 120 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 NDUFB1O75438 58 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 SPATA12Q7Z6I5 190 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 C1orf159Q96HA4 380 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 HIST1H2BLQ99880 126 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 TMEM133Q9H2Q1 129 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 GAGE2AQ6NT46 116 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 IMMP1LQ96LU5 166 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 PTPRDP23468 1912 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 PLXNA2O75051 1894 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 C15orf61A6NNL5 157 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 TMEM14DPA8MWL7 114 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 BCE1O60756 84 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 CD24P25063 80 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 HLA-DMBP28068 263 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 FXYD7P58549 80 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 UBE2E2Q96LR5 201 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 PILRAQ9UKJ1 303 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 TRPM7Q96QT4 1865 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 TRAV8-3A0A0A6YYJ7 113 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.24□□□□□ -1.73
NF1-219ENST00000579081 YPEL3P61236 119 aaPredicted RBP4.24□□□□□ -1.73
NF1-219ENST00000579081 LAGE3Q14657 143 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 PRR31Q5SQ13 230 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 SLC22A18ASQ8N1D0 253 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 SELENOKQ9Y6D0 94 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 PHF3Q92576 2039 aaKnown RBP4.24□□□□□ -1.73
NF1-219ENST00000579081 A0A1B0GW54 56 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 RMI2Q96E14 147 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 LSM4Q9Y4Z0 139 aaKnown RBP4.24□□□□□ -1.73
NF1-219ENST00000579081 NDUFS5O43920 106 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 ZNF708P17019 499 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 PRB3Q04118 309 aaPredicted RBP4.24□□□□□ -1.73
NF1-219ENST00000579081 FUT5Q11128 374 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 C5orf47Q569G3 176 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 MRPL14Q6P1L8 145 aaKnown RBP4.24□□□□□ -1.73
NF1-219ENST00000579081 C1QL2Q7Z5L3 287 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 AMN1Q8IY45 258 aa4.24□□□□□ -1.73
NF1-219ENST00000579081 TRAV13-1A0A0B4J241 112 aa4.23□□□□□ -1.73
NF1-219ENST00000579081 A0A0U1RQV1 116 aa4.23□□□□□ -1.73
NF1-219ENST00000579081 E9PQ18 207 aa4.23□□□□□ -1.73
NF1-219ENST00000579081 LY6DQ14210 128 aa4.23□□□□□ -1.73
NF1-219ENST00000579081 CFHR5Q9BXR6 569 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms