RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 NPCDR1Q9BY65 106 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 C14orf132Q9NPU4 83 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 OTORQ9NRC9 128 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 UFC1Q9Y3C8 167 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 ARL5AQ9Y689 179 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 TNRC6AQ8NDV7 1962 aaKnown RBP0.33□□□□□ -2.36
TOP2A-202ENST00000577541 CECR2Q9BXF3 1484 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 NUP98P52948 1817 aa0.33□□□□□ -2.36
TOP2A-202ENST00000577541 MYO5AQ9Y4I1 1855 aaKnown RBP0.33□□□□□ -2.36
TOP2A-202ENST00000577541 TRPM1Q7Z4N2 1603 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 SCN3AQ9NY46 2000 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 KMT2DO14686 5537 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 TRAV10A0A0B4J240 114 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 TCRBV4S1A1TA0A5B7 111 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 G3V2T6 193 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 H7BYZ3 331 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 PROSCO94903 275 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 DHFRP00374 187 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 TRGC2P03986 189 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 EFNA4P52798 201 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 TMBIM6P55061 237 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 EIF3IQ13347 325 aaKnown RBP0.32□□□□□ -2.36
TOP2A-202ENST00000577541 TMED2Q15363 201 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 MPV17LQ2QL34 196 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 BCL2L15Q5TBC7 163 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 GDF5OSQ5U4N7 250 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 KRTAP19-3Q7Z4W3 81 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 OR5D14Q8NGL3 314 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 AP3S1Q92572 193 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 LIMD2Q9BT23 127 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 CCDC94Q9BW85 323 aaPredicted RBP0.32□□□□□ -2.36
TOP2A-202ENST00000577541 NIT2Q9NQR4 276 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 GID8Q9NWU2 228 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 OR52A1Q9UKL2 312 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 PYCARDQ9ULZ3 195 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 SNURFQ9Y675 71 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 UNC13CQ8NB66 2214 aa0.32□□□□□ -2.36
TOP2A-202ENST00000577541 TECPR2O15040 1411 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 TET1Q8NFU7 2136 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 ALPK3Q96L96 1907 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 IGHV1-58A0A0C4DH39 117 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 A8MWV9 139 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 IFNA1P01562 189 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 HLA-EP13747 358 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 IL9P15248 144 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 ANP32AP39687 249 aaKnown RBP0.31□□□□□ -2.36
TOP2A-202ENST00000577541 DSCR4P56555 118 aaPredicted RBP0.31□□□□□ -2.36
TOP2A-202ENST00000577541 MRPS25P82663 173 aaKnown RBP0.31□□□□□ -2.36
TOP2A-202ENST00000577541 RPL19P84098 196 aaKnown RBP0.31□□□□□ -2.36
TOP2A-202ENST00000577541 POU6F1Q14863 301 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 ZCCHC23Q6ZST2 131 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 GRINAQ7Z429 371 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 ANGPTL5Q86XS5 388 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 ST6GALNAC3Q8NDV1 305 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 PPTC7Q8NI37 304 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 NEK7Q8TDX7 302 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 RAB37Q96AX2 223 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 OR2J1Q9GZK6 312 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 IMUPQ9GZP8 106 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 RASL12Q9NYN1 266 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 CASP8AP2Q9UKL3 1982 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 SYNE2Q8WXH0 6885 aaKnown RBP0.31□□□□□ -2.36
TOP2A-202ENST00000577541 FRAS1Q86XX4 4008 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 CNTRLQ7Z7A1 2325 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 FSIP2Q5CZC0 6907 aa0.31□□□□□ -2.36
TOP2A-202ENST00000577541 LAMA4Q16363 1823 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 TRGV10A0A0A0MS01 117 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 DUXBA0A1W2PPF3 345 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 E7EUB6 86 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 H7C1C5 153 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 NDUFC2O95298 119 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 PHBP35232 272 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 LCN6P62502 163 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 DEFB115Q30KQ5 88 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 FKBP1CQ5VVH2 108 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 HRCT1Q6UXD1 115 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 LINC00322Q6ZN03 302 aaPredicted RBP0.3□□□□□ -2.36
TOP2A-202ENST00000577541 OR4K15Q8NH41 348 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 TMEM254Q8TBM7 123 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 TEX47Q8TBZ9 253 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 CANT1Q8WVQ1 401 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 BORCS5Q969J3 196 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 CHCHD1Q96BP2 118 aaKnown RBP0.3□□□□□ -2.36
TOP2A-202ENST00000577541 AMELYQ99218 206 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 GPER1Q99527 375 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 PRRT1Q99946 306 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 SH3BGRL3Q9H299 93 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 POPDC3Q9HBV1 291 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 LYRM2Q9NU23 88 aaPredicted RBP0.3□□□□□ -2.36
TOP2A-202ENST00000577541 NHP2Q9NX24 153 aaKnown RBP0.3□□□□□ -2.36
TOP2A-202ENST00000577541 KIAA1549Q9HCM3 1950 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 PEAK1Q9H792 1746 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 UHRF1BP1Q6BDS2 1440 aa0.3□□□□□ -2.36
TOP2A-202ENST00000577541 HEATR1Q9H583 2144 aaKnown RBP0.29□□□□□ -2.36
TOP2A-202ENST00000577541 ZNF462Q96JM2 2506 aa0.29□□□□□ -2.36
TOP2A-202ENST00000577541 NISCHQ9Y2I1 1504 aa0.29□□□□□ -2.36
TOP2A-202ENST00000577541 A0A087WSZ3 146 aa0.29□□□□□ -2.36
TOP2A-202ENST00000577541 RIIAD1A6NNX1 92 aa0.29□□□□□ -2.36
TOP2A-202ENST00000577541 M0R233 179 aa0.29□□□□□ -2.36
TOP2A-202ENST00000577541 CXCL8P10145 99 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms