RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 CCDC115Q96NT0 180 aa0.98□□□□□ -2.25
COPS3-213ENST00000577210 LINC00467Q9BRT7 94 aa0.98□□□□□ -2.25
COPS3-213ENST00000577210 GGACTQ9BVM4 153 aa0.98□□□□□ -2.25
COPS3-213ENST00000577210 REG4Q9BYZ8 158 aa0.98□□□□□ -2.25
COPS3-213ENST00000577210 OR2H1Q9GZK4 316 aa0.98□□□□□ -2.25
COPS3-213ENST00000577210 CACYBPQ9HB71 228 aaKnown RBP0.98□□□□□ -2.25
COPS3-213ENST00000577210 LRTM1Q9HBL6 345 aa0.98□□□□□ -2.25
COPS3-213ENST00000577210 C19orf12Q9NSK7 152 aa0.98□□□□□ -2.25
COPS3-213ENST00000577210 GINS2Q9Y248 185 aa0.98□□□□□ -2.25
COPS3-213ENST00000577210 ZCCHC11Q5TAX3 1644 aaKnown RBP0.97□□□□□ -2.25
COPS3-213ENST00000577210 PLXNA3P51805 1871 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 FRMPD1Q5SYB0 1578 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 TAF1LQ8IZX4 1826 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 TRBV6-8A0A0A6YYG3 113 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 TRAV12-1A0A0B4J245 112 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 CCDC160A6NGH7 325 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 J3KT08 172 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 FAM107AO95990 144 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 DHFRP00374 187 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 NBEAP1P0C6P0 100 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 BCL2P10415 239 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 RPS3P23396 243 aaKnown RBP eCLIP0.97□□□□□ -2.25
COPS3-213ENST00000577210 SDC2P34741 201 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 RPL35P42766 123 aaKnown RBP0.97□□□□□ -2.25
COPS3-213ENST00000577210 EIF3IQ13347 325 aaKnown RBP0.97□□□□□ -2.25
COPS3-213ENST00000577210 PCOTHQ58A44 107 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 OR5D16Q8NGK9 328 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 ZNF563Q8TA94 476 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 ISOC1Q96CN7 298 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 TEX37Q96LM6 180 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 AIF1LQ9BQI0 150 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 LAMTOR3Q9UHA4 124 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 NAT8BQ9UHF3 227 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 LAMTOR2Q9Y2Q5 125 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 MED31Q9Y3C7 131 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 HSPB11Q9Y547 144 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 NUBP2Q9Y5Y2 271 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 LY96Q9Y6Y9 160 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 FHAD1B1AJZ9 1412 aa0.97□□□□□ -2.25
COPS3-213ENST00000577210 ZFHX2Q9C0A1 2572 aaPredicted RBP0.97□□□□□ -2.25
COPS3-213ENST00000577210 MYH11P35749 1972 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 COL5A3P25940 1745 aaPredicted RBP0.96□□□□□ -2.26
COPS3-213ENST00000577210 OR2T8A6NH00 312 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 M0QZK8 103 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 KPNA4O00629 521 aaPredicted RBP0.96□□□□□ -2.26
COPS3-213ENST00000577210 ROMO1P60602 79 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 RAB4BP61018 213 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 OR8B8Q15620 311 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 VMA21Q3ZAQ7 101 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 C1orf134Q5TEV5 83 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 TOMM20LQ6UXN7 152 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 Q8N2B8 174 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 OR4C6Q8NH72 309 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 BRK1Q8WUW1 75 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 RAB37Q96AX2 223 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 BATF3Q9NR55 127 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 TAS2R7Q9NYW3 318 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 OBSL1O75147 1896 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 TRAPPC8Q9Y2L5 1435 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 TRPM1Q7Z4N2 1603 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 NUP98P52948 1817 aa0.96□□□□□ -2.26
COPS3-213ENST00000577210 SBF1O95248 1867 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 COL4A5P29400 1685 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 TCOF1Q13428 1488 aaKnown RBP0.95□□□□□ -2.26
COPS3-213ENST00000577210 LOC107984640A0A0U1RRK4 108 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 LOC105371267A0A1B0GV96 52 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 IGKV2-29A2NJV5 120 aaPredicted RBP0.95□□□□□ -2.26
COPS3-213ENST00000577210 C9orf170A2RU37 121 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 ARL5CA6NH57 179 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 C5orf58C9J3I9 102 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 C5orf67F2Z3F1 127 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 ARPC5O15511 151 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 IGLV1-51P01701 117 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 RNASE3P12724 160 aaKnown RBP0.95□□□□□ -2.26
COPS3-213ENST00000577210 ZNF93P35789 620 aaPredicted RBP0.95□□□□□ -2.26
COPS3-213ENST00000577210 RAB5CP51148 216 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 PDE6HQ13956 83 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 TMEM14EPQ6UXP3 125 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 LINC00305Q7Z4B0 112 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 LRRC18Q8N456 261 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 FAM216BQ8N7L0 139 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 Q8N814 137 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 OR9Q1Q8NGQ5 310 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 OR5H6Q8NGV6 325 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 MUCL1Q96DR8 90 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 NAA38Q9BRA0 125 aaKnown RBP0.95□□□□□ -2.26
COPS3-213ENST00000577210 TCEAL2Q9H3H9 227 aaPredicted RBP0.95□□□□□ -2.26
COPS3-213ENST00000577210 TAF9BQ9HBM6 251 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 NIT2Q9NQR4 276 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 GSKIPQ9P0R6 139 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 PTPRBP23467 1997 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 MYH7BA7E2Y1 1941 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 MYH3P11055 1940 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 KDM5CP41229 1560 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 GBF1Q92538 1859 aa0.95□□□□□ -2.26
COPS3-213ENST00000577210 DLC1Q96QB1 1528 aa0.94□□□□□ -2.26
COPS3-213ENST00000577210 HEATR5AQ86XA9 2040 aa0.94□□□□□ -2.26
COPS3-213ENST00000577210 UBR2Q8IWV8 1755 aa0.94□□□□□ -2.26
COPS3-213ENST00000577210 MYH2Q9UKX2 1941 aa0.94□□□□□ -2.26
COPS3-213ENST00000577210 TRAV10A0A0B4J240 114 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms