RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 TDRG1Q3Y452 100 aa12.95□□□□□ -0.34
RAB40B-206ENST00000571995 TPTE2P1Q5T6R2 138 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 CCDC144NLQ6NUI1 221 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 RNF125Q96EQ8 232 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 ZNF503Q96F45 646 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 FAM120AOSQ5T036 256 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 WDR73Q6P4I2 378 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 DMRTC2Q8IXT2 367 aaPredicted RBP12.94□□□□□ -0.34
RAB40B-206ENST00000571995 STXBP6Q8NFX7 210 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 OR8A1Q8NGG7 326 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 C7orf69Q9H7B7 122 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 CFAP46Q8IYW2 2715 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 SIAH2O43255 324 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 JOSD1Q15040 202 aaPredicted RBP12.94□□□□□ -0.34
RAB40B-206ENST00000571995 Q6ZN92 141 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 TEX45Q8NA69 505 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 C1RLQ9NZP8 487 aa12.94□□□□□ -0.34
RAB40B-206ENST00000571995 MRPL32Q9BYC8 188 aaKnown RBP12.93□□□□□ -0.34
RAB40B-206ENST00000571995 SLC25A39Q9BZJ4 359 aaPredicted RBP12.93□□□□□ -0.34
RAB40B-206ENST00000571995 A0A1W2PRE2 83 aa12.93□□□□□ -0.34
RAB40B-206ENST00000571995 IGLC7A0M8Q6 106 aa12.93□□□□□ -0.34
RAB40B-206ENST00000571995 NPIPB5A8MRT5 1133 aa12.93□□□□□ -0.34
RAB40B-206ENST00000571995 CLEC2AQ6UVW9 174 aa12.93□□□□□ -0.34
RAB40B-206ENST00000571995 RCHY1Q96PM5 261 aa12.93□□□□□ -0.34
RAB40B-206ENST00000571995 A6NNC1 897 aa12.93□□□□□ -0.34
RAB40B-206ENST00000571995 A8MWL6 223 aa12.93□□□□□ -0.34
RAB40B-206ENST00000571995 S100A4P26447 101 aaKnown RBP12.93□□□□□ -0.34
RAB40B-206ENST00000571995 SAA4P35542 130 aa12.93□□□□□ -0.34
RAB40B-206ENST00000571995 COMPP49747 757 aaPredicted RBP12.93□□□□□ -0.34
RAB40B-206ENST00000571995 RHOGP84095 191 aa12.93□□□□□ -0.34
RAB40B-206ENST00000571995 C11orf42Q8N5U0 333 aa12.93□□□□□ -0.34
RAB40B-206ENST00000571995 CDC42EP3Q9UKI2 254 aa12.93□□□□□ -0.34
RAB40B-206ENST00000571995 HSBP1L1C9JCN9 74 aa12.92□□□□□ -0.34
RAB40B-206ENST00000571995 RELQ04864 619 aaPredicted RBP12.92□□□□□ -0.34
RAB40B-206ENST00000571995 C15orf32Q32M92 178 aa12.92□□□□□ -0.34
RAB40B-206ENST00000571995 C11orf44Q8N8P7 122 aa12.92□□□□□ -0.34
RAB40B-206ENST00000571995 IGHV2-70P01814 119 aa12.92□□□□□ -0.34
RAB40B-206ENST00000571995 CCL19Q99731 98 aa12.92□□□□□ -0.34
RAB40B-206ENST00000571995 F11RQ9Y624 299 aaKnown RBP12.92□□□□□ -0.34
RAB40B-206ENST00000571995 HLA-DRB1P01911 266 aa12.92□□□□□ -0.34
RAB40B-206ENST00000571995 FA2HQ7L5A8 372 aa12.92□□□□□ -0.34
RAB40B-206ENST00000571995 YPEL4Q96NS1 127 aa12.92□□□□□ -0.34
RAB40B-206ENST00000571995 NRN1Q9NPD7 142 aa12.92□□□□□ -0.34
RAB40B-206ENST00000571995 HLA-DMBP28068 263 aa12.91□□□□□ -0.34
RAB40B-206ENST00000571995 SLAQ13239 276 aa12.91□□□□□ -0.34
RAB40B-206ENST00000571995 BCL6BQ8N143 479 aaPredicted RBP12.91□□□□□ -0.34
RAB40B-206ENST00000571995 NUP35Q8NFH5 326 aa12.91□□□□□ -0.34
RAB40B-206ENST00000571995 V9GYV3 84 aa12.91□□□□□ -0.34
RAB40B-206ENST00000571995 CSMD1Q96PZ7 3565 aa12.91□□□□□ -0.34
RAB40B-206ENST00000571995 PRSS46E5RG02 174 aa12.91□□□□□ -0.34
RAB40B-206ENST00000571995 SPRY2O43597 315 aa12.91□□□□□ -0.34
RAB40B-206ENST00000571995 FOXL1Q12952 345 aa12.91□□□□□ -0.34
RAB40B-206ENST00000571995 GPR82Q96P67 336 aa12.91□□□□□ -0.34
RAB40B-206ENST00000571995 PRDM13Q9H4Q3 707 aa12.91□□□□□ -0.34
RAB40B-206ENST00000571995 TWIST1Q15672 202 aa12.91□□□□□ -0.34
RAB40B-206ENST00000571995 CTAG1AP78358 180 aa12.9□□□□□ -0.34
RAB40B-206ENST00000571995 TMEM183BQ1AE95 376 aa12.9□□□□□ -0.34
RAB40B-206ENST00000571995 C5orf64Q2M2E5 130 aa12.9□□□□□ -0.34
RAB40B-206ENST00000571995 NDFIP1Q9BT67 221 aa12.9□□□□□ -0.34
RAB40B-206ENST00000571995 NDUFB8O95169 186 aa12.9□□□□□ -0.34
RAB40B-206ENST00000571995 TRGV3P03979 118 aa12.9□□□□□ -0.34
RAB40B-206ENST00000571995 ZFP36P26651 326 aaKnown RBP12.9□□□□□ -0.34
RAB40B-206ENST00000571995 CHRDL1Q9BU40 450 aa12.9□□□□□ -0.34
RAB40B-206ENST00000571995 HLA-DQA1P01909 254 aa12.89□□□□□ -0.35
RAB40B-206ENST00000571995 HNRNPA3P51991 378 aaKnown RBP12.89□□□□□ -0.35
RAB40B-206ENST00000571995 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
RAB40B-206ENST00000571995 GCGP01275 180 aa12.89□□□□□ -0.35
RAB40B-206ENST00000571995 HINT1P49773 126 aaPredicted RBP12.89□□□□□ -0.35
RAB40B-206ENST00000571995 UTP20O75691 2785 aaKnown RBP12.89□□□□□ -0.35
RAB40B-206ENST00000571995 ITGB1BP1O14713 200 aa12.89□□□□□ -0.35
RAB40B-206ENST00000571995 IGLV2-23P01705 113 aa12.89□□□□□ -0.35
RAB40B-206ENST00000571995 SPATA45Q537H7 98 aa12.89□□□□□ -0.35
RAB40B-206ENST00000571995 Q71RC1 249 aaPredicted RBP12.89□□□□□ -0.35
RAB40B-206ENST00000571995 S100A7AQ86SG5 101 aa12.89□□□□□ -0.35
RAB40B-206ENST00000571995 GOSR1O95249 250 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 ARL3P36405 182 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 CR1LQ2VPA4 569 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 C18orf15Q96N68 181 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 C19orf24Q9BVV8 132 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 KLK15Q9H2R5 256 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 SOX21Q9Y651 276 aaPredicted RBP12.88□□□□□ -0.35
RAB40B-206ENST00000571995 TGFAP01135 160 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 ZNF25P17030 456 aaPredicted RBP12.88□□□□□ -0.35
RAB40B-206ENST00000571995 TMEM30BQ3MIR4 351 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 NEU4Q8WWR8 484 aaPredicted RBP12.88□□□□□ -0.35
RAB40B-206ENST00000571995 FXYD5Q96DB9 178 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 TCRAP04437 139 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 OR5AL1P0C617 328 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 Q6ZWC4 215 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 TMEM75Q8N9X5 138 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 FAM167A-AS1Q96KT0 104 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 DCHS2Q6V1P9 2916 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 C19orf84I3L1E1 186 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 POU2AF1Q16633 256 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 IGF2-ASQ6U949 168 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 KCNS1Q96KK3 526 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 C16orf92Q96LL3 132 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 OSTCQ9NRP0 149 aa12.88□□□□□ -0.35
RAB40B-206ENST00000571995 ITPR1Q14643 2758 aa12.87□□□□□ -0.35
RAB40B-206ENST00000571995 TMEM189A5PLL7 270 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms