RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 APOHP02749 345 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 STAG3L2P0CL84 134 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 STAG3L3P0CL85 134 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 ARL14EPLP0DKL9 152 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 BMI1P35226 326 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 CLLU1Q5K131 121 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 OR4F17Q8NGA8 305 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 OR9G4Q8NGQ1 327 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 GRAMD2BQ96HH9 432 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 FAM167A-AS1Q96KT0 104 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 OR4F4Q96R69 305 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 HRH4Q9H3N8 390 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 U3KQE9 123 aa11.75□□□□□ -0.53
HERPUD1-219ENST00000570273 STAB1Q9NY15 2570 aa11.74□□□□□ -0.53
HERPUD1-219ENST00000570273 ANK2Q01484 3957 aa11.74□□□□□ -0.53
HERPUD1-219ENST00000570273 A0A1W2PS18 150 aa11.74□□□□□ -0.53
HERPUD1-219ENST00000570273 CXorf1O96002 111 aa11.74□□□□□ -0.53
HERPUD1-219ENST00000570273 EDN2P20800 178 aa11.74□□□□□ -0.53
HERPUD1-219ENST00000570273 PQLC2Q6ZP29 291 aa11.74□□□□□ -0.53
HERPUD1-219ENST00000570273 OR8I2Q8N0Y5 310 aa11.74□□□□□ -0.53
HERPUD1-219ENST00000570273 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
HERPUD1-219ENST00000570273 TMEM231Q9H6L2 316 aa11.74□□□□□ -0.53
HERPUD1-219ENST00000570273 C2orf70A6NJV1 201 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 M0QZ24 198 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 OVOL1O14753 267 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 BUB3O43684 328 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 PYYP10082 97 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 UBE2L3P68036 154 aaKnown RBP11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 SHISA2Q6UWI4 295 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 IL34Q6ZMJ4 242 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 BPIFA4PQ86YQ2 179 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 STXBP6Q8NFX7 210 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 MARC2Q969Z3 335 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 RHPN1-AS1Q9BWJ2 59 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 SMPXQ9UHP9 88 aa11.73□□□□□ -0.53
HERPUD1-219ENST00000570273 TRAV1-1A0A0B4J248 108 aa11.72□□□□□ -0.53
HERPUD1-219ENST00000570273 GP9P14770 177 aa11.72□□□□□ -0.53
HERPUD1-219ENST00000570273 RPL7P18124 248 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-219ENST00000570273 GCHFRP30047 84 aa11.72□□□□□ -0.53
HERPUD1-219ENST00000570273 C1orf194Q5T5A4 169 aa11.72□□□□□ -0.53
HERPUD1-219ENST00000570273 ZNF503Q96F45 646 aa11.72□□□□□ -0.53
HERPUD1-219ENST00000570273 OR51M1Q9H341 326 aa11.72□□□□□ -0.53
HERPUD1-219ENST00000570273 TMPRSS5Q9H3S3 457 aa11.72□□□□□ -0.53
HERPUD1-219ENST00000570273 CHEK1O14757 476 aa11.71□□□□□ -0.53
HERPUD1-219ENST00000570273 OR10J4P0C629 311 aa11.71□□□□□ -0.53
HERPUD1-219ENST00000570273 FOLR2P14207 255 aa11.71□□□□□ -0.53
HERPUD1-219ENST00000570273 C16orf54Q6UWD8 224 aa11.71□□□□□ -0.53
HERPUD1-219ENST00000570273 SPATA3Q8NHX4 192 aa11.71□□□□□ -0.53
HERPUD1-219ENST00000570273 GLMPQ8WWB7 406 aa11.71□□□□□ -0.53
HERPUD1-219ENST00000570273 GPR82Q96P67 336 aa11.71□□□□□ -0.53
HERPUD1-219ENST00000570273 ELOVL1Q9BW60 279 aa11.71□□□□□ -0.53
HERPUD1-219ENST00000570273 TMEM14CQ9P0S9 112 aa11.71□□□□□ -0.53
HERPUD1-219ENST00000570273 CSN3P07498 182 aa11.7□□□□□ -0.54
HERPUD1-219ENST00000570273 ATF4P18848 351 aaPredicted RBP11.7□□□□□ -0.54
HERPUD1-219ENST00000570273 CBLN1P23435 193 aa11.7□□□□□ -0.54
HERPUD1-219ENST00000570273 GALR1P47211 349 aa11.7□□□□□ -0.54
HERPUD1-219ENST00000570273 CCL20P78556 96 aa11.7□□□□□ -0.54
HERPUD1-219ENST00000570273 SIGLEC15Q6ZMC9 328 aa11.7□□□□□ -0.54
HERPUD1-219ENST00000570273 LINC00482Q8N8I6 264 aa11.7□□□□□ -0.54
HERPUD1-219ENST00000570273 LYPD6BQ8NI32 183 aa11.7□□□□□ -0.54
HERPUD1-219ENST00000570273 DYNLRB2Q8TF09 96 aa11.7□□□□□ -0.54
HERPUD1-219ENST00000570273 TMEM167BQ9NRX6 74 aa11.7□□□□□ -0.54
HERPUD1-219ENST00000570273 MRPS12O15235 138 aaKnown RBP11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 SNRPCP09234 159 aaKnown RBP11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 FXYD5Q96DB9 178 aa11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 GNG13Q9P2W3 67 aa11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 SELENOKQ9Y6D0 94 aa11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 HELTA6NFD8 242 aa11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 H3BTX0 84 aa11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 IFNA1P01562 189 aa11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 HIST1H1EP10412 219 aaKnown RBP11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 PSMB3P49720 205 aa11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 PPT1P50897 306 aa11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 ADAMTSL5Q6ZMM2 481 aa11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 TCF24Q7RTU0 167 aa11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 BLNKQ8WV28 456 aa11.69□□□□□ -0.54
HERPUD1-219ENST00000570273 ZNF785A8K8V0 405 aa11.68□□□□□ -0.54
HERPUD1-219ENST00000570273 IGLC2P0DOY2 106 aa11.68□□□□□ -0.54
HERPUD1-219ENST00000570273 MLXQ9UH92 298 aa11.68□□□□□ -0.54
HERPUD1-219ENST00000570273 SMAD5-AS1Q9Y6J3 95 aa11.68□□□□□ -0.54
HERPUD1-219ENST00000570273 WNK1Q9H4A3 2382 aa11.67□□□□□ -0.54
HERPUD1-219ENST00000570273 H3BQ15 152 aa11.67□□□□□ -0.54
HERPUD1-219ENST00000570273 NBEAP1P0C6P0 100 aa11.67□□□□□ -0.54
HERPUD1-219ENST00000570273 UBE2G2P60604 165 aa11.67□□□□□ -0.54
HERPUD1-219ENST00000570273 RPL11P62913 178 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-219ENST00000570273 MANBALQ9NQG1 85 aa11.67□□□□□ -0.54
HERPUD1-219ENST00000570273 ZNF586Q9NXT0 402 aa11.67□□□□□ -0.54
HERPUD1-219ENST00000570273 A0A087X0K7 114 aa11.66□□□□□ -0.54
HERPUD1-219ENST00000570273 SAP30O75446 220 aa11.66□□□□□ -0.54
HERPUD1-219ENST00000570273 GUK1Q16774 197 aa11.66□□□□□ -0.54
HERPUD1-219ENST00000570273 HAGHQ16775 308 aa11.66□□□□□ -0.54
HERPUD1-219ENST00000570273 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.66□□□□□ -0.54
HERPUD1-219ENST00000570273 SUN5Q8TC36 379 aa11.66□□□□□ -0.54
HERPUD1-219ENST00000570273 IGKV3-7A0A075B6H7 116 aa11.65□□□□□ -0.54
HERPUD1-219ENST00000570273 TRBV19A0A075B6N1 114 aa11.65□□□□□ -0.54
HERPUD1-219ENST00000570273 PAGE4O60829 102 aa11.65□□□□□ -0.54
HERPUD1-219ENST00000570273 BCL2P10415 239 aa11.65□□□□□ -0.54
HERPUD1-219ENST00000570273 MEOX2P50222 304 aa11.65□□□□□ -0.54
HERPUD1-219ENST00000570273 TOR2AQ5JU69 321 aa11.65□□□□□ -0.54
HERPUD1-219ENST00000570273 C17orf77Q96MU5 243 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms