RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 IL4P05112 153 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 CTSGP08311 255 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 NBEAP1P0C6P0 100 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 HIST1H1EP10412 219 aaKnown RBP11.37□□□□□ -0.59
COMMD4-221ENST00000567935 AKR1C3P42330 323 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 IER3P46695 156 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 RAB9AP51151 201 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 ATP5G2Q06055 141 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 RNF212Q495C1 297 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 FAM209BQ5JX69 171 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 ZNF343Q6P1L6 599 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 BPIFA4PQ86YQ2 179 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 HIST1H2BAQ96A08 127 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 USMG5Q96IX5 58 aa11.37□□□□□ -0.59
COMMD4-221ENST00000567935 COLCA2A8K830 154 aa11.36□□□□□ -0.59
COMMD4-221ENST00000567935 GGTLC3B5MD39 225 aa11.36□□□□□ -0.59
COMMD4-221ENST00000567935 BMPR1BO00238 502 aa11.36□□□□□ -0.59
COMMD4-221ENST00000567935 PYYP10082 97 aa11.36□□□□□ -0.59
COMMD4-221ENST00000567935 FOLR2P14207 255 aa11.36□□□□□ -0.59
COMMD4-221ENST00000567935 TAS2R60P59551 318 aa11.36□□□□□ -0.59
COMMD4-221ENST00000567935 SUMO1P63165 101 aaKnown RBP11.36□□□□□ -0.59
COMMD4-221ENST00000567935 C9orf152Q5JTZ5 239 aa11.36□□□□□ -0.59
COMMD4-221ENST00000567935 LINC01551Q86U37 167 aa11.36□□□□□ -0.59
COMMD4-221ENST00000567935 OR4F17Q8NGA8 305 aa11.36□□□□□ -0.59
COMMD4-221ENST00000567935 OR2T8A6NH00 312 aa11.35□□□□□ -0.59
COMMD4-221ENST00000567935 LINC01548A6NM66 108 aa11.35□□□□□ -0.59
COMMD4-221ENST00000567935 S100A9P06702 114 aaKnown RBP11.35□□□□□ -0.59
COMMD4-221ENST00000567935 RELQ04864 619 aaPredicted RBP11.35□□□□□ -0.59
COMMD4-221ENST00000567935 Q6YL49 198 aa11.35□□□□□ -0.59
COMMD4-221ENST00000567935 LYPD1Q8N2G4 141 aa11.35□□□□□ -0.59
COMMD4-221ENST00000567935 C2CD4CQ8TF44 421 aa11.35□□□□□ -0.59
COMMD4-221ENST00000567935 VPREB3Q9UKI3 123 aa11.35□□□□□ -0.59
COMMD4-221ENST00000567935 SOX21Q9Y651 276 aaPredicted RBP11.35□□□□□ -0.59
COMMD4-221ENST00000567935 HELTA6NFD8 242 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 SH2D7A6NKC9 451 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-221ENST00000567935 H7BYZ3 331 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 TGOLN2O43493 480 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 IGHV4-59P01825 116 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 CRYBB3P26998 211 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 PPIFP30405 207 aaKnown RBP11.34□□□□□ -0.59
COMMD4-221ENST00000567935 MYCNOSP40205 109 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 RPL35P42766 123 aaKnown RBP11.34□□□□□ -0.59
COMMD4-221ENST00000567935 PDE6HQ13956 83 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 ZNF329Q86UD4 541 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 C5orf17Q8NAS9 161 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 ELOVL1Q9BW60 279 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 OTORQ9NRC9 128 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 RABAC1Q9UI14 185 aa11.34□□□□□ -0.59
COMMD4-221ENST00000567935 A0A0G2JLM5 398 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 ZNF98A6NK75 572 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 PEX7O00628 323 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 TRGV3P03979 118 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 RPL7P18124 248 aaKnown RBP11.33□□□□□ -0.6
COMMD4-221ENST00000567935 GPR183P32249 361 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 SRP14P37108 136 aaKnown RBP11.33□□□□□ -0.6
COMMD4-221ENST00000567935 CNN1P51911 297 aaKnown RBP11.33□□□□□ -0.6
COMMD4-221ENST00000567935 USF2Q15853 346 aaPredicted RBP11.33□□□□□ -0.6
COMMD4-221ENST00000567935 BCL6BQ8N143 479 aaPredicted RBP11.33□□□□□ -0.6
COMMD4-221ENST00000567935 ISOC2Q96AB3 205 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 SMIM12Q96EX1 92 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 BTF3L4Q96K17 158 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 CCDC140Q96MF4 163 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 YPEL4Q96NS1 127 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 OR5B12Q96R08 314 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 DERL1Q9BUN8 251 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 S4R3C0 116 aa11.33□□□□□ -0.6
COMMD4-221ENST00000567935 MDFIC2A0A1B0GVS7 189 aa11.32□□□□□ -0.6
COMMD4-221ENST00000567935 CLEC3BP05452 202 aa11.32□□□□□ -0.6
COMMD4-221ENST00000567935 S100PP25815 95 aa11.32□□□□□ -0.6
COMMD4-221ENST00000567935 ADMP35318 185 aa11.32□□□□□ -0.6
COMMD4-221ENST00000567935 GNG4P50150 75 aa11.32□□□□□ -0.6
COMMD4-221ENST00000567935 TMEM86BQ8N661 226 aa11.32□□□□□ -0.6
COMMD4-221ENST00000567935 GPR82Q96P67 336 aa11.32□□□□□ -0.6
COMMD4-221ENST00000567935 IMMP2LQ96T52 175 aa11.32□□□□□ -0.6
COMMD4-221ENST00000567935 CHRDL1Q9BU40 450 aa11.32□□□□□ -0.6
COMMD4-221ENST00000567935 EPDR1Q9UM22 224 aa11.32□□□□□ -0.6
COMMD4-221ENST00000567935 VWFP04275 2813 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 TRBV20OR9-2A0A075B6H5 130 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 IGLV1-40P01703 118 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 IGHV3-23P01764 117 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 IGLC2P0DOY2 106 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 ATF4P18848 351 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-221ENST00000567935 RAB5AP20339 215 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 TPPP2P59282 170 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 RANP62826 216 aaKnown RBP11.31□□□□□ -0.6
COMMD4-221ENST00000567935 BLCAPP62952 87 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 CFHR3Q02985 330 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 CLEC19AQ6UXS0 136 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 FAM24BQ8N5W8 94 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 ARL6IP6Q8N6S5 226 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 BLNKQ8WV28 456 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 MS4A10Q96PG2 267 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 ATG101Q9BSB4 218 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 PRSS22Q9GZN4 317 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 NPFFR1Q9GZQ6 430 aa11.31□□□□□ -0.6
COMMD4-221ENST00000567935 TRBV19A0A075B6N1 114 aa11.3□□□□□ -0.6
COMMD4-221ENST00000567935 TRBV24-1A0A075B6N3 115 aa11.3□□□□□ -0.6
COMMD4-221ENST00000567935 PGPA6NDG6 321 aa11.3□□□□□ -0.6
COMMD4-221ENST00000567935 MRPS12O15235 138 aaKnown RBP11.3□□□□□ -0.6
COMMD4-221ENST00000567935 ZNF253O75346 499 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms