RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	EWSR1	Q01844	656 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	ID3	Q02535	119 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	ZNF90	Q03938	601 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	RNF212	Q495C1	297 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	TMEM41B	Q5BJD5	291 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	ACTL10	Q5JWF8	245 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	C1orf194	Q5T5A4	169 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	LCE2C	Q5TA81	110 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	OR8G2P	Q6IF36	304 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	MORN3	Q6PF18	240 aa	Predicted RBP	5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	SIGLEC15	Q6ZMC9	328 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	TRPT1	Q86TN4	253 aa	Known RBP	5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	COQ8A	Q8NI60	647 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	RNF125	Q96EQ8	232 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	TRGV9	Q99603	122 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	PBDC1	Q9BVG4	233 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	NKX6-2	Q9C056	277 aa	Predicted RBP	5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	SEPSECS	Q9HD40	501 aa	Known RBP	5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	NRN1	Q9NPD7	142 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	GSN-AS1	Q9NRJ2	163 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	STRAP	Q9Y3F4	350 aa	Known RBP	5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	CBY1	Q9Y3M2	126 aa		5.06	□□□□□ -1.6
SF3B3-209	ENST00000567635	NUPR2	A6NF83	97 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	GOSR2	O14653	212 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	ADAP1	O75689	374 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	SIX6	O95475	246 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	CFD	P00746	253 aa	Predicted RBP	5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	GIG44	P09565	113 aa	Predicted RBP	5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	SPP1	P10451	314 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	H2BFS	P57053	126 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	LYZ	P61626	148 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	CYCS	P99999	105 aa	Known RBP	5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	OR2F1	Q13607	317 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	PMS2P11	Q13670	270 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	OPCML	Q14982	345 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	ANKRD39	Q53RE8	183 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	PSMG4	Q5JS54	123 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	SPANXN5	Q5MJ07	72 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	THAP8	Q8NA92	274 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	OR2T35	Q8NGX2	323 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	SFT2D1	Q8WV19	159 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	PSENEN	Q9NZ42	101 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	FBXL17	Q9UF56	701 aa		5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	KLK5	Q9Y337	293 aa	Predicted RBP	5.05	□□□□□ -1.6
SF3B3-209	ENST00000567635	IGKV1OR2-108	A0A075B7D4	117 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	HMSD	A8MTL9	139 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	PRSS46	E5RG02	174 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635		G3V3Q6	166 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	TEX46	H3BTG2	121 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	MPC2	O95563	127 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	APOC3	P02656	99 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	RLN2	P04090	185 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	PVALB	P20472	110 aa	Predicted RBP	5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	ID1	P41134	155 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	NKX2-1	P43699	371 aa	Predicted RBP	5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	RAB5B	P61020	215 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	NUTF2	P61970	127 aa	Known RBP	5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	LGALSL	Q3ZCW2	172 aa	Predicted RBP	5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	GSG1L	Q6UXU4	331 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	OR8I2	Q8N0Y5	310 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	OR11H4	Q8NGC9	324 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	OR4D5	Q8NGN0	318 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	C11orf45	Q8TAV5	145 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	SMIM8	Q96KF7	97 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	MFF	Q9GZY8	342 aa		5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	C11orf68	Q9H3H3	251 aa	Known RBP	5.04	□□□□□ -1.6
SF3B3-209	ENST00000567635	C5orf51	A6NDU8	294 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635		H3BMM0	161 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635		H3BP45	60 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635		L7N2F9	121 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	DEFB4A	O15263	64 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	NMB	P08949	121 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	S100A7	P31151	101 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	NANOS2	P60321	138 aa	Known RBP	5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	AKR1C1	Q04828	323 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	IL15RA	Q13261	267 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	IAH1	Q2TAA2	248 aa	Predicted RBP	5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	UQCC3	Q6UW78	93 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	TMEM144	Q7Z5S9	345 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	SVBP	Q8N300	66 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	CSNK1G2-AS1	Q8NCQ2	148 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	BPIFC	Q8NFQ6	507 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	C2orf50	Q96LR7	162 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	C1QTNF4	Q9BXJ3	329 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	NMES1	Q9C002	83 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	SLC25A32	Q9H2D1	315 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	NIT2	Q9NQR4	276 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	GSKIP	Q9P0R6	139 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	SLC45A2	Q9UMX9	530 aa		5.03	□□□□□ -1.6
SF3B3-209	ENST00000567635	SMCO3	A2RU48	225 aa		5.02	□□□□□ -1.61
SF3B3-209	ENST00000567635	ZNF705E	A8MWA4	302 aa	Predicted RBP	5.02	□□□□□ -1.61
SF3B3-209	ENST00000567635	ISLR	O14498	428 aa		5.02	□□□□□ -1.61
SF3B3-209	ENST00000567635	CCS	O14618	274 aa		5.02	□□□□□ -1.61
SF3B3-209	ENST00000567635	SSSCA1	O60232	199 aa		5.02	□□□□□ -1.61
SF3B3-209	ENST00000567635	NDUFS6	O75380	124 aa	Known RBP	5.02	□□□□□ -1.61
SF3B3-209	ENST00000567635	EIF3G	O75821	320 aa	Known RBP eCLIP	5.02	□□□□□ -1.61
SF3B3-209	ENST00000567635	LY6G6C	O95867	125 aa		5.02	□□□□□ -1.61
SF3B3-209	ENST00000567635	SCGB1D2	O95969	90 aa		5.02	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms