RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 APELAP0DMC3 54 aa18.43■□□□□ 0.54
LINC00543-201ENST00000567234 IER3P46695 156 aa18.43■□□□□ 0.54
LINC00543-201ENST00000567234 TFPI2P48307 235 aa18.43■□□□□ 0.54
LINC00543-201ENST00000567234 C10orf113Q5VZT2 155 aa18.43■□□□□ 0.54
LINC00543-201ENST00000567234 ZNF562Q6V9R5 426 aa18.43■□□□□ 0.54
LINC00543-201ENST00000567234 C10orf105Q8TEF2 133 aa18.43■□□□□ 0.54
LINC00543-201ENST00000567234 ZNF503Q96F45 646 aa18.43■□□□□ 0.54
LINC00543-201ENST00000567234 WNT10AQ9GZT5 417 aa18.43■□□□□ 0.54
LINC00543-201ENST00000567234 V9GYV3 84 aa18.43■□□□□ 0.54
LINC00543-201ENST00000567234 SPG11Q96JI7 2443 aa18.43■□□□□ 0.54
LINC00543-201ENST00000567234 CENPEQ02224 2701 aa18.43■□□□□ 0.54
LINC00543-201ENST00000567234 TSPOP30536 169 aa18.42■□□□□ 0.54
LINC00543-201ENST00000567234 TRAV30A0A087WSZ9 112 aa18.42■□□□□ 0.54
LINC00543-201ENST00000567234 SCO2A0A1W2PP80 73 aa18.42■□□□□ 0.54
LINC00543-201ENST00000567234 A0A1W2PS18 150 aa18.42■□□□□ 0.54
LINC00543-201ENST00000567234 VWC2LB2RUY7 222 aa18.42■□□□□ 0.54
LINC00543-201ENST00000567234 I3L2K1 104 aa18.42■□□□□ 0.54
LINC00543-201ENST00000567234 OR7C2O60412 319 aa18.42■□□□□ 0.54
LINC00543-201ENST00000567234 CD24P25063 80 aa18.42■□□□□ 0.54
LINC00543-201ENST00000567234 FAM167A-AS1Q96KT0 104 aa18.42■□□□□ 0.54
LINC00543-201ENST00000567234 CELSR2Q9HCU4 2923 aa18.42■□□□□ 0.54
LINC00543-201ENST00000567234 FAM106CPP0CH98 169 aa18.41■□□□□ 0.54
LINC00543-201ENST00000567234 CD33P20138 364 aa18.41■□□□□ 0.54
LINC00543-201ENST00000567234 HIST2H2BCQ6DN03 193 aa18.41■□□□□ 0.54
LINC00543-201ENST00000567234 TMEM136Q6ZRR5 245 aa18.41■□□□□ 0.54
LINC00543-201ENST00000567234 RNASE8Q8TDE3 154 aaKnown RBP18.41■□□□□ 0.54
LINC00543-201ENST00000567234 BORCS7Q96B45 105 aa18.41■□□□□ 0.54
LINC00543-201ENST00000567234 AJUBAQ96IF1 538 aa18.41■□□□□ 0.54
LINC00543-201ENST00000567234 GCN1Q92616 2671 aaKnown RBP18.41■□□□□ 0.54
LINC00543-201ENST00000567234 AMY1AP04745 511 aa18.4■□□□□ 0.54
LINC00543-201ENST00000567234 FAM162BQ5T6X4 162 aa18.4■□□□□ 0.54
LINC00543-201ENST00000567234 CLEC2AQ6UVW9 174 aa18.4■□□□□ 0.54
LINC00543-201ENST00000567234 PATE2Q6UY27 113 aa18.4■□□□□ 0.54
LINC00543-201ENST00000567234 WIPF2Q8TF74 440 aaPredicted RBP18.4■□□□□ 0.54
LINC00543-201ENST00000567234 ALKBH7Q9BT30 221 aaPredicted RBP18.4■□□□□ 0.54
LINC00543-201ENST00000567234 SLC25A2Q9BXI2 301 aa18.4■□□□□ 0.54
LINC00543-201ENST00000567234 C1RLQ9NZP8 487 aa18.4■□□□□ 0.54
LINC00543-201ENST00000567234 NAT8BQ9UHF3 227 aa18.4■□□□□ 0.54
LINC00543-201ENST00000567234 A0A1W2PRE2 83 aa18.39■□□□□ 0.54
LINC00543-201ENST00000567234 ISLRO14498 428 aa18.39■□□□□ 0.54
LINC00543-201ENST00000567234 TMEM11P17152 192 aa18.39■□□□□ 0.54
LINC00543-201ENST00000567234 PLP1P60201 277 aa18.39■□□□□ 0.54
LINC00543-201ENST00000567234 PAX8Q06710 450 aa18.39■□□□□ 0.54
LINC00543-201ENST00000567234 SMIM15Q7Z3B0 74 aa18.39■□□□□ 0.54
LINC00543-201ENST00000567234 CSMD2Q7Z408 3487 aa18.39■□□□□ 0.53
LINC00543-201ENST00000567234 NPIPB5A8MRT5 1133 aa18.39■□□□□ 0.53
LINC00543-201ENST00000567234 K7EN84 100 aa18.39■□□□□ 0.53
LINC00543-201ENST00000567234 FBLN7Q53RD9 439 aa18.39■□□□□ 0.53
LINC00543-201ENST00000567234 RUSC1-AS1Q66K80 236 aa18.39■□□□□ 0.53
LINC00543-201ENST00000567234 TRAV9-2A0A087WT02 112 aa18.38■□□□□ 0.53
LINC00543-201ENST00000567234 SAA4P35542 130 aa18.38■□□□□ 0.53
LINC00543-201ENST00000567234 ATP5J2P56134 94 aa18.38■□□□□ 0.53
LINC00543-201ENST00000567234 RHOGP84095 191 aa18.38■□□□□ 0.53
LINC00543-201ENST00000567234 PET117Q6UWS5 81 aa18.38■□□□□ 0.53
LINC00543-201ENST00000567234 ARPC1AQ92747 370 aa18.38■□□□□ 0.53
LINC00543-201ENST00000567234 ZNF355PQ9NSJ1 428 aa18.38■□□□□ 0.53
LINC00543-201ENST00000567234 NCBP2LA6PVI3 153 aaKnown RBP18.37■□□□□ 0.53
LINC00543-201ENST00000567234 C3orf79P0CE67 100 aa18.37■□□□□ 0.53
LINC00543-201ENST00000567234 NIT1Q86X76 327 aa18.37■□□□□ 0.53
LINC00543-201ENST00000567234 STXBP6Q8NFX7 210 aa18.37■□□□□ 0.53
LINC00543-201ENST00000567234 PERPQ96FX8 193 aa18.37■□□□□ 0.53
LINC00543-201ENST00000567234 PSMG3-AS1Q96PY0 264 aa18.37■□□□□ 0.53
LINC00543-201ENST00000567234 PGPEP1LA6NFU8 196 aa18.37■□□□□ 0.53
LINC00543-201ENST00000567234 NPFFO15130 113 aa18.37■□□□□ 0.53
LINC00543-201ENST00000567234 KRTAP10-9P60411 292 aa18.37■□□□□ 0.53
LINC00543-201ENST00000567234 IGHV4-61A0A0C4DH41 118 aa18.36■□□□□ 0.53
LINC00543-201ENST00000567234 K7EIM0 57 aa18.36■□□□□ 0.53
LINC00543-201ENST00000567234 IGLC1P0CG04 106 aa18.36■□□□□ 0.53
LINC00543-201ENST00000567234 MORN5Q5VZ52 161 aa18.36■□□□□ 0.53
LINC00543-201ENST00000567234 TTC9CQ8N5M4 171 aa18.36■□□□□ 0.53
LINC00543-201ENST00000567234 PTPN13Q12923 2485 aa18.35■□□□□ 0.53
LINC00543-201ENST00000567234 GNG4P50150 75 aa18.35■□□□□ 0.53
LINC00543-201ENST00000567234 KLF5Q13887 457 aaPredicted RBP18.35■□□□□ 0.53
LINC00543-201ENST00000567234 LINC00305Q7Z4B0 112 aa18.35■□□□□ 0.53
LINC00543-201ENST00000567234 NBPF19A0A087WUL8 3843 aa18.35■□□□□ 0.53
LINC00543-201ENST00000567234 TRAV5A0A0B4J249 113 aa18.35■□□□□ 0.53
LINC00543-201ENST00000567234 CENPVL3A0A0U1RRI6 287 aa18.35■□□□□ 0.53
LINC00543-201ENST00000567234 SMIM27A0A1W2PRY6 76 aa18.35■□□□□ 0.53
LINC00543-201ENST00000567234 UBE2L3P68036 154 aaKnown RBP18.35■□□□□ 0.53
LINC00543-201ENST00000567234 OR8I2Q8N0Y5 310 aa18.35■□□□□ 0.53
LINC00543-201ENST00000567234 PAXXQ9BUH6 204 aa18.35■□□□□ 0.53
LINC00543-201ENST00000567234 ABCA1O95477 2261 aa18.34■□□□□ 0.53
LINC00543-201ENST00000567234 IGHV3-21A0A0B4J1V1 117 aa18.34■□□□□ 0.53
LINC00543-201ENST00000567234 HLA-DRB1P01911 266 aa18.34■□□□□ 0.53
LINC00543-201ENST00000567234 DSCR9P59020 149 aa18.34■□□□□ 0.53
LINC00543-201ENST00000567234 TIGITQ495A1 244 aa18.34■□□□□ 0.53
LINC00543-201ENST00000567234 Q8N9W7 124 aa18.34■□□□□ 0.53
LINC00543-201ENST00000567234 OR4C5Q8NGB2 326 aa18.34■□□□□ 0.53
LINC00543-201ENST00000567234 FAM103A1Q9BTL3 118 aaKnown RBP18.34■□□□□ 0.53
LINC00543-201ENST00000567234 POLQO75417 2590 aa18.34■□□□□ 0.53
LINC00543-201ENST00000567234 ABCA2Q9BZC7 2435 aa18.33■□□□□ 0.53
LINC00543-201ENST00000567234 F2Z2F3 143 aa18.33■□□□□ 0.53
LINC00543-201ENST00000567234 SLC17A3O00476 420 aa18.33■□□□□ 0.53
LINC00543-201ENST00000567234 ASPHD1Q5U4P2 390 aa18.33■□□□□ 0.53
LINC00543-201ENST00000567234 OR1B1Q8NGR6 318 aa18.33■□□□□ 0.53
LINC00543-201ENST00000567234 TSKUQ8WUA8 353 aa18.33■□□□□ 0.53
LINC00543-201ENST00000567234 RNF114Q9Y508 228 aa18.33■□□□□ 0.53
LINC00543-201ENST00000567234 BMPR1BO00238 502 aa18.33■□□□□ 0.52
LINC00543-201ENST00000567234 ORM2P19652 201 aa18.33■□□□□ 0.52
LINC00543-201ENST00000567234 PIP4P2Q8N4L2 257 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms