RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 PPP1R14DQ9NXH3 145 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 SLC45A2Q9UMX9 530 aa11.41□□□□□ -0.58
CDH3-205ENST00000566808 TRAV8-2A0A0B4J237 113 aa11.4□□□□□ -0.58
CDH3-205ENST00000566808 HIST1H1AQ02539 215 aaPredicted RBP11.4□□□□□ -0.58
CDH3-205ENST00000566808 OR2F1Q13607 317 aa11.4□□□□□ -0.58
CDH3-205ENST00000566808 IGFL4Q6B9Z1 124 aa11.4□□□□□ -0.58
CDH3-205ENST00000566808 TMED4Q7Z7H5 227 aa11.4□□□□□ -0.58
CDH3-205ENST00000566808 CROCCP3Q8IVE0 287 aa11.4□□□□□ -0.58
CDH3-205ENST00000566808 OR1B1Q8NGR6 318 aa11.4□□□□□ -0.58
CDH3-205ENST00000566808 RBPMSQ93062 196 aaKnown RBP11.4□□□□□ -0.58
CDH3-205ENST00000566808 VSIG2Q96IQ7 327 aa11.4□□□□□ -0.58
CDH3-205ENST00000566808 CNBD2Q96M20 576 aa11.4□□□□□ -0.58
CDH3-205ENST00000566808 C20orf144Q9BQM9 153 aa11.4□□□□□ -0.58
CDH3-205ENST00000566808 TMEM222Q9H0R3 208 aa11.4□□□□□ -0.58
CDH3-205ENST00000566808 U3KQ87 197 aa11.4□□□□□ -0.58
CDH3-205ENST00000566808 TRAV9-2A0A087WT02 112 aa11.39□□□□□ -0.59
CDH3-205ENST00000566808 CDS2O95674 445 aa11.39□□□□□ -0.59
CDH3-205ENST00000566808 GPX4P36969 197 aaPredicted RBP11.39□□□□□ -0.59
CDH3-205ENST00000566808 CDKN1BP46527 198 aa11.39□□□□□ -0.59
CDH3-205ENST00000566808 TRGV9Q99603 122 aa11.39□□□□□ -0.59
CDH3-205ENST00000566808 SNURFLB1AK76 121 aa11.38□□□□□ -0.59
CDH3-205ENST00000566808 NPIPB6E9PJ23 425 aa11.38□□□□□ -0.59
CDH3-205ENST00000566808 CFDP00746 253 aaPredicted RBP11.38□□□□□ -0.59
CDH3-205ENST00000566808 RNASE10Q5GAN6 216 aaKnown RBP11.38□□□□□ -0.59
CDH3-205ENST00000566808 CCDC28AQ8IWP9 274 aa11.38□□□□□ -0.59
CDH3-205ENST00000566808 LGI3Q8N145 548 aa11.38□□□□□ -0.59
CDH3-205ENST00000566808 LINC00528Q8N1L1 170 aa11.38□□□□□ -0.59
CDH3-205ENST00000566808 OR8A1Q8NGG7 326 aa11.38□□□□□ -0.59
CDH3-205ENST00000566808 LHFPL5Q8TAF8 219 aa11.38□□□□□ -0.59
CDH3-205ENST00000566808 ZFAND1Q8TCF1 268 aa11.38□□□□□ -0.59
CDH3-205ENST00000566808 MSRB1Q9NZV6 116 aa11.38□□□□□ -0.59
CDH3-205ENST00000566808 K7EP13 123 aa11.37□□□□□ -0.59
CDH3-205ENST00000566808 NRG4Q8WWG1 115 aa11.37□□□□□ -0.59
CDH3-205ENST00000566808 LINC00467Q9BRT7 94 aa11.37□□□□□ -0.59
CDH3-205ENST00000566808 DNAH8Q96JB1 4490 aa11.37□□□□□ -0.59
CDH3-205ENST00000566808 OXTP01178 125 aa11.36□□□□□ -0.59
CDH3-205ENST00000566808 C1QBP02746 253 aa11.36□□□□□ -0.59
CDH3-205ENST00000566808 OR5AC1P0C628 307 aa11.36□□□□□ -0.59
CDH3-205ENST00000566808 S100A7P31151 101 aa11.36□□□□□ -0.59
CDH3-205ENST00000566808 SNX29P2Q8IUI4 249 aa11.36□□□□□ -0.59
CDH3-205ENST00000566808 OR13C8Q8NGS7 320 aa11.36□□□□□ -0.59
CDH3-205ENST00000566808 ICOSQ9Y6W8 199 aa11.36□□□□□ -0.59
CDH3-205ENST00000566808 LY96Q9Y6Y9 160 aa11.36□□□□□ -0.59
CDH3-205ENST00000566808 FAT3Q8TDW7 4589 aa11.35□□□□□ -0.59
CDH3-205ENST00000566808 SULT1A3P0DMM9 295 aa11.35□□□□□ -0.59
CDH3-205ENST00000566808 SULT1A4P0DMN0 295 aa11.35□□□□□ -0.59
CDH3-205ENST00000566808 ATP5IP56385 69 aaPredicted RBP11.35□□□□□ -0.59
CDH3-205ENST00000566808 FGL1Q08830 312 aa11.35□□□□□ -0.59
CDH3-205ENST00000566808 MEF2DQ14814 521 aa11.35□□□□□ -0.59
CDH3-205ENST00000566808 GGNBP1Q5YKI7 109 aa11.35□□□□□ -0.59
CDH3-205ENST00000566808 SELENOHQ8IZQ5 122 aaKnown RBP11.35□□□□□ -0.59
CDH3-205ENST00000566808 THAP8Q8NA92 274 aa11.35□□□□□ -0.59
CDH3-205ENST00000566808 DTD1Q8TEA8 209 aa11.35□□□□□ -0.59
CDH3-205ENST00000566808 GLYATL2Q8WU03 294 aa11.35□□□□□ -0.59
CDH3-205ENST00000566808 FAM30AQ9NZY2 134 aa11.35□□□□□ -0.59
CDH3-205ENST00000566808 IGKV1OR2-108A0A075B7D4 117 aa11.34□□□□□ -0.59
CDH3-205ENST00000566808 TBPP20226 339 aa11.34□□□□□ -0.59
CDH3-205ENST00000566808 DAZ2Q13117 558 aaKnown RBP11.34□□□□□ -0.59
CDH3-205ENST00000566808 TMEM268Q5VZI3 342 aa11.34□□□□□ -0.59
CDH3-205ENST00000566808 Q6ZTI0 123 aa11.34□□□□□ -0.59
CDH3-205ENST00000566808 TMEM147Q9BVK8 224 aa11.34□□□□□ -0.59
CDH3-205ENST00000566808 HSPB7Q9UBY9 170 aa11.34□□□□□ -0.59
CDH3-205ENST00000566808 TRGV2A0A075B6R0 118 aa11.33□□□□□ -0.6
CDH3-205ENST00000566808 TEX13DA0A0J9YY54 714 aaPredicted RBP11.33□□□□□ -0.6
CDH3-205ENST00000566808 SMIM31A0A1B0GVY4 71 aa11.33□□□□□ -0.6
CDH3-205ENST00000566808 TNFAIP8O95379 198 aa11.33□□□□□ -0.6
CDH3-205ENST00000566808 GPR107Q5VW38 600 aa11.33□□□□□ -0.6
CDH3-205ENST00000566808 NAA60Q9H7X0 242 aa11.33□□□□□ -0.6
CDH3-205ENST00000566808 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
CDH3-205ENST00000566808 RNF213Q63HN8 5207 aa11.32□□□□□ -0.6
CDH3-205ENST00000566808 CXCL3P19876 107 aa11.32□□□□□ -0.6
CDH3-205ENST00000566808 PSG3Q16557 428 aa11.32□□□□□ -0.6
CDH3-205ENST00000566808 GFI1BQ5VTD9 330 aa11.32□□□□□ -0.6
CDH3-205ENST00000566808 TERB2Q8NHR7 220 aa11.32□□□□□ -0.6
CDH3-205ENST00000566808 PAX4O43316 350 aa11.31□□□□□ -0.6
CDH3-205ENST00000566808 APOA1P02647 267 aa11.31□□□□□ -0.6
CDH3-205ENST00000566808 CD3DP04234 171 aa11.31□□□□□ -0.6
CDH3-205ENST00000566808 ORM2P19652 201 aa11.31□□□□□ -0.6
CDH3-205ENST00000566808 EVI2AP22794 236 aa11.31□□□□□ -0.6
CDH3-205ENST00000566808 Q6ZSA8 131 aa11.31□□□□□ -0.6
CDH3-205ENST00000566808 BPIFCQ8NFQ6 507 aa11.31□□□□□ -0.6
CDH3-205ENST00000566808 MARCH1Q8TCQ1 289 aa11.31□□□□□ -0.6
CDH3-205ENST00000566808 RBKSQ9H477 322 aa11.31□□□□□ -0.6
CDH3-205ENST00000566808 C14orf166Q9Y224 244 aaKnown RBP11.31□□□□□ -0.6
CDH3-205ENST00000566808 LRCOL1A6NCL2 159 aa11.3□□□□□ -0.6
CDH3-205ENST00000566808 H3BRN7 92 aa11.3□□□□□ -0.6
CDH3-205ENST00000566808 RPL7P18124 248 aaKnown RBP11.3□□□□□ -0.6
CDH3-205ENST00000566808 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
CDH3-205ENST00000566808 IZUMO2Q6UXV1 221 aa11.3□□□□□ -0.6
CDH3-205ENST00000566808 RPUSD4Q96CM3 377 aaKnown RBP11.3□□□□□ -0.6
CDH3-205ENST00000566808 VCX3BQ9H321 246 aa11.3□□□□□ -0.6
CDH3-205ENST00000566808 A0A087X0K7 114 aa11.29□□□□□ -0.6
CDH3-205ENST00000566808 PSCAO43653 123 aa11.29□□□□□ -0.6
CDH3-205ENST00000566808 ZNF324O75467 553 aaPredicted RBP11.29□□□□□ -0.6
CDH3-205ENST00000566808 SCGB2B2Q4G0G5 96 aa11.29□□□□□ -0.6
CDH3-205ENST00000566808 LYPD5Q6UWN5 251 aa11.29□□□□□ -0.6
CDH3-205ENST00000566808 C10orf126Q8N4M7 172 aa11.29□□□□□ -0.6
CDH3-205ENST00000566808 Q8N814 137 aa11.29□□□□□ -0.6
CDH3-205ENST00000566808 OR1S1Q8NH92 325 aa11.29□□□□□ -0.6
CDH3-205ENST00000566808 IL22RA2Q969J5 263 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms