RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 LYNX1P0DP58 116 aa13.29□□□□□ -0.28
CMTM3-213ENST00000566756 ZNF25P17030 456 aaPredicted RBP13.29□□□□□ -0.28
CMTM3-213ENST00000566756 CAMPP49913 170 aa13.29□□□□□ -0.28
CMTM3-213ENST00000566756 FOXA3P55318 350 aaPredicted RBP13.29□□□□□ -0.28
CMTM3-213ENST00000566756 LINC00322Q6ZN03 302 aaPredicted RBP13.29□□□□□ -0.28
CMTM3-213ENST00000566756 LYPD1Q8N2G4 141 aa13.29□□□□□ -0.28
CMTM3-213ENST00000566756 GTSF1Q8WW33 167 aa13.29□□□□□ -0.28
CMTM3-213ENST00000566756 RASL11BQ9BPW5 248 aa13.29□□□□□ -0.28
CMTM3-213ENST00000566756 SMG1Q96Q15 3661 aaKnown RBP13.28□□□□□ -0.28
CMTM3-213ENST00000566756 PPIAL4CA0A0B4J2A2 164 aa13.28□□□□□ -0.28
CMTM3-213ENST00000566756 DLEU1O43261 78 aa13.28□□□□□ -0.28
CMTM3-213ENST00000566756 PPIAL4GP0DN37 164 aa13.28□□□□□ -0.28
CMTM3-213ENST00000566756 TCF24Q7RTU0 167 aa13.28□□□□□ -0.28
CMTM3-213ENST00000566756 C2orf70A6NJV1 201 aa13.27□□□□□ -0.28
CMTM3-213ENST00000566756 LYZP61626 148 aa13.27□□□□□ -0.28
CMTM3-213ENST00000566756 ASPHD1Q5U4P2 390 aa13.27□□□□□ -0.28
CMTM3-213ENST00000566756 NDFIP1Q9BT67 221 aa13.27□□□□□ -0.28
CMTM3-213ENST00000566756 SSBP4Q9BWG4 385 aaPredicted RBP13.27□□□□□ -0.28
CMTM3-213ENST00000566756 FBXL15Q9H469 300 aa13.27□□□□□ -0.28
CMTM3-213ENST00000566756 LPAR2Q9HBW0 351 aa13.27□□□□□ -0.28
CMTM3-213ENST00000566756 RPH3ALQ9UNE2 315 aa13.27□□□□□ -0.28
CMTM3-213ENST00000566756 HRNRQ86YZ3 2850 aaPredicted RBP13.27□□□□□ -0.28
CMTM3-213ENST00000566756 A6NNC1 897 aa13.27□□□□□ -0.29
CMTM3-213ENST00000566756 HAX1O00165 279 aa13.27□□□□□ -0.29
CMTM3-213ENST00000566756 CRXO43186 299 aaPredicted RBP13.27□□□□□ -0.29
CMTM3-213ENST00000566756 RNASEKQ6P5S7 137 aaKnown RBP13.27□□□□□ -0.29
CMTM3-213ENST00000566756 LY6G5BQ8NDX9 201 aa13.27□□□□□ -0.29
CMTM3-213ENST00000566756 OR2D3Q8NGH3 330 aa13.27□□□□□ -0.29
CMTM3-213ENST00000566756 TMEM208Q9BTX3 173 aa13.27□□□□□ -0.29
CMTM3-213ENST00000566756 MRPS16Q9Y3D3 137 aaKnown RBP13.27□□□□□ -0.29
CMTM3-213ENST00000566756 TRAV9-2A0A087WT02 112 aa13.26□□□□□ -0.29
CMTM3-213ENST00000566756 IGLV2-11P01706 119 aa13.26□□□□□ -0.29
CMTM3-213ENST00000566756 GPR6P46095 362 aaPredicted RBP13.26□□□□□ -0.29
CMTM3-213ENST00000566756 EBLN2Q6P2I7 272 aa13.26□□□□□ -0.29
CMTM3-213ENST00000566756 TMEM75Q8N9X5 138 aa13.26□□□□□ -0.29
CMTM3-213ENST00000566756 TIMD4Q96H15 378 aa13.26□□□□□ -0.29
CMTM3-213ENST00000566756 SHANK2-AS3Q9BTD1 123 aa13.26□□□□□ -0.29
CMTM3-213ENST00000566756 WNT10AQ9GZT5 417 aa13.26□□□□□ -0.29
CMTM3-213ENST00000566756 ZFP30Q9Y2G7 519 aa13.26□□□□□ -0.29
CMTM3-213ENST00000566756 IGKV1-17P01599 117 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 G0S2P27469 103 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 HNRNPA3P51991 378 aaKnown RBP13.25□□□□□ -0.29
CMTM3-213ENST00000566756 GATD1Q8NB37 220 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 URB1-AS1Q96HZ7 61 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 SGK494Q96LW2 274 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 BBC3Q96PG8 261 aaPredicted RBP13.25□□□□□ -0.29
CMTM3-213ENST00000566756 TXN2Q99757 166 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 IGHV3-21A0A0B4J1V1 117 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 H3BRN7 92 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 LIPFP07098 398 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 COL8A1P27658 744 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 LEMD1Q68G75 181 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 Q6ZN92 141 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 BPIFA4PQ86YQ2 179 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 MALRD1Q5VYJ5 2156 aa13.25□□□□□ -0.29
CMTM3-213ENST00000566756 TRBV19A0A075B6N1 114 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 K7EIM0 57 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 K7EQM0 130 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 OR5AL1P0C617 328 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 LINC00614P0C842 121 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 APELAP0DMC3 54 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 PLGLAQ15195 96 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 OR4F17Q8NGA8 305 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 OR11H6Q8NGC7 330 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 PGLYRP4Q96LB8 373 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 TMEM70Q9BUB7 260 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 GSX1Q9H4S2 264 aaPredicted RBP13.24□□□□□ -0.29
CMTM3-213ENST00000566756 LAMTOR2Q9Y2Q5 125 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 DOPEY1Q5JWR5 2465 aa13.24□□□□□ -0.29
CMTM3-213ENST00000566756 TRAV30A0A087WSZ9 112 aa13.23□□□□□ -0.29
CMTM3-213ENST00000566756 LOC102724200A0A096LPH7 203 aaPredicted RBP13.23□□□□□ -0.29
CMTM3-213ENST00000566756 A0A1B0GW15 77 aa13.23□□□□□ -0.29
CMTM3-213ENST00000566756 APOHP02749 345 aaPredicted RBP13.23□□□□□ -0.29
CMTM3-213ENST00000566756 COX7A1P24310 79 aa13.23□□□□□ -0.29
CMTM3-213ENST00000566756 CEACAM3P40198 252 aa13.23□□□□□ -0.29
CMTM3-213ENST00000566756 NPBQ8NG41 125 aa13.23□□□□□ -0.29
CMTM3-213ENST00000566756 ZNF48Q96MX3 618 aaPredicted RBP13.23□□□□□ -0.29
CMTM3-213ENST00000566756 NDUFA3O95167 84 aa13.23□□□□□ -0.29
CMTM3-213ENST00000566756 FAM120AOSQ5T036 256 aa13.23□□□□□ -0.29
CMTM3-213ENST00000566756 UBTD1Q9HAC8 227 aa13.23□□□□□ -0.29
CMTM3-213ENST00000566756 GOLT1BQ9Y3E0 138 aa13.23□□□□□ -0.29
CMTM3-213ENST00000566756 LY6HO94772 140 aa13.22□□□□□ -0.29
CMTM3-213ENST00000566756 HTR1DP28221 377 aa13.22□□□□□ -0.29
CMTM3-213ENST00000566756 LCN12Q6JVE5 192 aa13.22□□□□□ -0.29
CMTM3-213ENST00000566756 GOLT1AQ6ZVE7 132 aa13.22□□□□□ -0.29
CMTM3-213ENST00000566756 LHFPL4Q7Z7J7 247 aa13.22□□□□□ -0.29
CMTM3-213ENST00000566756 ZNF843Q8N446 348 aa13.22□□□□□ -0.29
CMTM3-213ENST00000566756 DPM3Q9P2X0 92 aa13.22□□□□□ -0.29
CMTM3-213ENST00000566756 LRBAP50851 2863 aa13.22□□□□□ -0.29
CMTM3-213ENST00000566756 CHEK1O14757 476 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 NBR2O15453 112 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 CNIH1O95406 144 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 TSPOP30536 169 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 PDE6HQ13956 83 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 Q6AWC8 147 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 SIGLEC15Q6ZMC9 328 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 WI2-2373I1.2A0A1W2PRP0 233 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 H3BTX0 84 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 OVOL3O00110 214 aa13.21□□□□□ -0.29
CMTM3-213ENST00000566756 TIMM23O14925 209 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms