RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 TRAV5A0A0B4J249 113 aa13.07□□□□□ -0.32
RAB40C-210ENST00000566290 S100A9P06702 114 aaKnown RBP13.07□□□□□ -0.32
RAB40C-210ENST00000566290 HIST1H1EP10412 219 aaKnown RBP13.07□□□□□ -0.32
RAB40C-210ENST00000566290 ELOBQ15370 118 aa13.07□□□□□ -0.32
RAB40C-210ENST00000566290 C3orf56Q8N813 242 aa13.07□□□□□ -0.32
RAB40C-210ENST00000566290 TRAV41A0A0B4J266 112 aa13.06□□□□□ -0.32
RAB40C-210ENST00000566290 H3BUX3 64 aa13.06□□□□□ -0.32
RAB40C-210ENST00000566290 OR2J3O76001 311 aa13.06□□□□□ -0.32
RAB40C-210ENST00000566290 CTSGP08311 255 aa13.06□□□□□ -0.32
RAB40C-210ENST00000566290 OR10J4P0C629 311 aa13.06□□□□□ -0.32
RAB40C-210ENST00000566290 ATF4P18848 351 aaPredicted RBP13.06□□□□□ -0.32
RAB40C-210ENST00000566290 RAB9AP51151 201 aa13.06□□□□□ -0.32
RAB40C-210ENST00000566290 LYZP61626 148 aa13.06□□□□□ -0.32
RAB40C-210ENST00000566290 PDE6HQ13956 83 aa13.06□□□□□ -0.32
RAB40C-210ENST00000566290 HIST2H2BDQ6DRA6 164 aa13.06□□□□□ -0.32
RAB40C-210ENST00000566290 ZNF600Q6ZNG1 722 aa13.06□□□□□ -0.32
RAB40C-210ENST00000566290 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
RAB40C-210ENST00000566290 TRAV9-1A0A075B6T8 112 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 IGHV3-21A0A0B4J1V1 117 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 LOC105371267A0A1B0GV96 52 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 H7BYZ3 331 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 CRYBA1P05813 215 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 NBEAP1P0C6P0 100 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 PYYP10082 97 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 RPL35P42766 123 aaKnown RBP13.05□□□□□ -0.32
RAB40C-210ENST00000566290 RHOGP84095 191 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 ECSCRQ19T08 205 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 Q56UQ5 140 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 FAM209BQ5JX69 171 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 ZNF329Q86UD4 541 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 FAM24BQ8N5W8 94 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 C5orf17Q8NAS9 161 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 OR5T1Q8NG75 326 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 EEF1AKMT3Q96AZ1 226 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 DERL1Q9BUN8 251 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 ELOVL1Q9BW60 279 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 ESM1Q9NQ30 184 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 KLF12Q9Y4X4 402 aa13.05□□□□□ -0.32
RAB40C-210ENST00000566290 TRBV6-1A0A0K0K1D8 114 aa13.04□□□□□ -0.32
RAB40C-210ENST00000566290 TMEM89A2RUT3 159 aa13.04□□□□□ -0.32
RAB40C-210ENST00000566290 AP4M1O00189 453 aa13.04□□□□□ -0.32
RAB40C-210ENST00000566290 MRPS12O15235 138 aaKnown RBP13.04□□□□□ -0.32
RAB40C-210ENST00000566290 ZNF253O75346 499 aa13.04□□□□□ -0.32
RAB40C-210ENST00000566290 IL4P05112 153 aa13.04□□□□□ -0.32
RAB40C-210ENST00000566290 PFN1P07737 140 aaKnown RBP13.04□□□□□ -0.32
RAB40C-210ENST00000566290 SUMO1P63165 101 aaKnown RBP13.04□□□□□ -0.32
RAB40C-210ENST00000566290 KIAA0141Q14154 515 aaPredicted RBP13.04□□□□□ -0.32
RAB40C-210ENST00000566290 C15orf32Q32M92 178 aa13.04□□□□□ -0.32
RAB40C-210ENST00000566290 IGF2BP2-AS1Q96M15 143 aa13.04□□□□□ -0.32
RAB40C-210ENST00000566290 NBEAL2Q6ZNJ1 2754 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 HELTA6NFD8 242 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 IGLC2P0DOY2 106 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 S100PP25815 95 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 CRYBB3P26998 211 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 PPIFP30405 207 aaKnown RBP13.03□□□□□ -0.32
RAB40C-210ENST00000566290 HILS1P60008 231 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 RAB5BP61020 215 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 TMEM219Q86XT9 240 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 USMG5Q96IX5 58 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 OR5B12Q96R08 314 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 OTORQ9NRC9 128 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 MLXQ9UH92 298 aa13.03□□□□□ -0.32
RAB40C-210ENST00000566290 MDFIC2A0A1B0GVS7 189 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 C1orf196B1AJZ1 125 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 BMPR1BO00238 502 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 PEX7O00628 323 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 GGCTO75223 188 aaKnown RBP13.02□□□□□ -0.33
RAB40C-210ENST00000566290 TYMSP04818 313 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 ADMP35318 185 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 GNG4P50150 75 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 CNN1P51911 297 aaKnown RBP13.02□□□□□ -0.33
RAB40C-210ENST00000566290 FOXL1Q12952 345 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 PRR31Q5SQ13 230 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 TEX38Q6PEX7 206 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 SIGLECL1Q8N7X8 197 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 OR4F17Q8NGA8 305 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 ZNF418Q8TF45 676 aaPredicted RBP13.02□□□□□ -0.33
RAB40C-210ENST00000566290 SFRP2Q96HF1 295 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 ZNF414Q96IQ9 312 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 GPR82Q96P67 336 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 ATG101Q9BSB4 218 aa13.02□□□□□ -0.33
RAB40C-210ENST00000566290 TRBV19A0A075B6N1 114 aa13.01□□□□□ -0.33
RAB40C-210ENST00000566290 ZNF98A6NK75 572 aa13.01□□□□□ -0.33
RAB40C-210ENST00000566290 IER3P46695 156 aa13.01□□□□□ -0.33
RAB40C-210ENST00000566290 CFHR3Q02985 330 aa13.01□□□□□ -0.33
RAB40C-210ENST00000566290 RELQ04864 619 aaPredicted RBP13.01□□□□□ -0.33
RAB40C-210ENST00000566290 USF2Q15853 346 aaPredicted RBP13.01□□□□□ -0.33
RAB40C-210ENST00000566290 TMEM183BQ1AE95 376 aa13.01□□□□□ -0.33
RAB40C-210ENST00000566290 OCC1Q8TAD7 63 aa13.01□□□□□ -0.33
RAB40C-210ENST00000566290 CCDC140Q96MF4 163 aa13.01□□□□□ -0.33
RAB40C-210ENST00000566290 ZFAND3Q9H8U3 227 aa13.01□□□□□ -0.33
RAB40C-210ENST00000566290 OSTCQ9NRP0 149 aa13.01□□□□□ -0.33
RAB40C-210ENST00000566290 EPDR1Q9UM22 224 aa13.01□□□□□ -0.33
RAB40C-210ENST00000566290 G3V318 75 aa13□□□□□ -0.33
RAB40C-210ENST00000566290 GCGP01275 180 aa13□□□□□ -0.33
RAB40C-210ENST00000566290 IGLV1-40P01703 118 aa13□□□□□ -0.33
RAB40C-210ENST00000566290 RPL7P18124 248 aaKnown RBP13□□□□□ -0.33
RAB40C-210ENST00000566290 DEFB112Q30KQ8 113 aa13□□□□□ -0.33
RAB40C-210ENST00000566290 CENPWQ5EE01 88 aa13□□□□□ -0.33
RAB40C-210ENST00000566290 C1orf194Q5T5A4 169 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms