RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 TSPAN19P0C672 248 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 PIPP12273 146 aaPredicted RBP2.38□□□□□ -2.03
CNOT1-209ENST00000566240 IL9P15248 144 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 CBR1P16152 277 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 PEBP1P30086 187 aaKnown RBP2.38□□□□□ -2.03
CNOT1-209ENST00000566240 FUSP35637 526 aaKnown RBP eCLIP2.38□□□□□ -2.03
CNOT1-209ENST00000566240 CTAG1AP78358 180 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 ZNF846Q147U1 533 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 DEFB133Q30KQ1 61 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 OR52R1Q8NGF1 315 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 OR4C6Q8NH72 309 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 CCL4L1Q8NHW4 92 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 ZNF563Q8TA94 476 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 ZNF471Q9BX82 626 aaPredicted RBP2.38□□□□□ -2.03
CNOT1-209ENST00000566240 TVP23BQ9NYZ1 205 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 ASB4Q9Y574 426 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 DSPPQ9NZW4 1301 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 EML5Q05BV3 1969 aa2.38□□□□□ -2.03
CNOT1-209ENST00000566240 TNRC6BQ9UPQ9 1833 aaKnown RBP2.38□□□□□ -2.03
CNOT1-209ENST00000566240 MYO9BQ13459 2157 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 SCN3AQ9NY46 2000 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 MYO7AQ13402 2215 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 A0A1W2PQD3 144 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 CLDN25C9JDP6 229 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 KPNA4O00629 521 aaPredicted RBP2.37□□□□□ -2.03
CNOT1-209ENST00000566240 PFDN1O60925 122 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 ZNF728P0DKX0 622 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 FGF6P10767 208 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 IFI30P13284 250 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 CD24P25063 80 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 HAAOP46952 286 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 SNRPGP62308 76 aaKnown RBP2.37□□□□□ -2.03
CNOT1-209ENST00000566240 CCL7P80098 99 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 MEF2BQ02080 365 aaPredicted RBP2.37□□□□□ -2.03
CNOT1-209ENST00000566240 PLCXD2Q0VAA5 305 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 SRSF6Q13247 344 aaKnown RBP2.37□□□□□ -2.03
CNOT1-209ENST00000566240 ACOT6Q3I5F7 207 aaPredicted RBP2.37□□□□□ -2.03
CNOT1-209ENST00000566240 C12orf73Q69YU5 71 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 LINC00299Q6ZSB3 139 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 DEFB123Q8N688 67 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 DEFB119Q8N690 84 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 MCFD2Q8NI22 146 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 PATE1Q8WXA2 126 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 NIPSNAP1Q9BPW8 284 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 OR8D2Q9GZM6 311 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 C6orf62Q9GZU0 229 aaPredicted RBP2.37□□□□□ -2.03
CNOT1-209ENST00000566240 TCEAL2Q9H3H9 227 aaPredicted RBP2.37□□□□□ -2.03
CNOT1-209ENST00000566240 ACER3Q9NUN7 267 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 SSR3Q9UNL2 185 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 UTRNP46939 3433 aa2.37□□□□□ -2.03
CNOT1-209ENST00000566240 PRRC2BQ5JSZ5 2229 aaKnown RBP2.37□□□□□ -2.03
CNOT1-209ENST00000566240 HTTP42858 3142 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 TMEM269A0A1B0GVZ9 245 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 RPS4Y1P22090 263 aaKnown RBP2.36□□□□□ -2.03
CNOT1-209ENST00000566240 HOXA6P31267 233 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 SDC2P34741 201 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 RAB13P51153 203 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 RPL30P62888 115 aaKnown RBP2.36□□□□□ -2.03
CNOT1-209ENST00000566240 NNATQ16517 81 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 MOGQ16653 247 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 ZNF767PQ75MW2 155 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 SSX8Q7RTT4 187 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 C10orf111Q8N326 155 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 MORN4Q8NDC4 146 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 SDF2Q99470 211 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 DCSTAMPQ9H295 470 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 NDUFB11Q9NX14 153 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 ZNF337Q9Y3M9 751 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 FAM215AQ9Y5M1 114 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 NINQ8N4C6 2090 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 EXPH5Q8NEV8 1989 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 SPAG17Q6Q759 2223 aa2.36□□□□□ -2.03
CNOT1-209ENST00000566240 A0A1B0GWA3 101 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 SMIM9A6NGZ8 99 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 ZNF670-ZNF695F2Z2N8 137 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 BHLHE40O14503 412 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 PDCD5O14737 125 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 OR2T1O43869 369 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 IGF2P01344 180 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 IFNA6P05013 189 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 UCHL1P09936 223 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 GUCA1AP43080 201 aaPredicted RBP2.35□□□□□ -2.03
CNOT1-209ENST00000566240 POLR2HP52434 150 aaKnown RBP2.35□□□□□ -2.03
CNOT1-209ENST00000566240 FXYD7P58549 80 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 ERVS71-1P61550 626 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 VBP1P61758 197 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 LSM3P62310 102 aaKnown RBP2.35□□□□□ -2.03
CNOT1-209ENST00000566240 PPP3R1P63098 170 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 DCDP81605 110 aaKnown RBP2.35□□□□□ -2.03
CNOT1-209ENST00000566240 ZNF181Q2M3W8 571 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 TRIQKQ629K1 86 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 GLT8D1Q68CQ7 371 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 XAF1Q6GPH4 301 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 ACBD7Q8N6N7 88 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 OR4X1Q8NH49 305 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 ACOT12Q8WYK0 555 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 ERMAPQ96PL5 475 aaPredicted RBP2.35□□□□□ -2.03
CNOT1-209ENST00000566240 CCDC32Q9BV29 185 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 CMC2Q9NRP2 79 aa2.35□□□□□ -2.03
CNOT1-209ENST00000566240 IL20Q9NYY1 176 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms