RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 HS3ST2Q9Y278 367 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 LHFPL6Q9Y693 200 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 XIRP1Q702N8 1843 aaKnown RBP1.4□□□□□ -2.19
UBR1-205ENST00000564540 EML6Q6ZMW3 1958 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 BORCS7-ASMTA0A0B4J1R7 106 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 TRAV5A0A0B4J249 113 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 IGHV1-58A0A0C4DH39 117 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 LOC107984640A0A0U1RRK4 108 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 C9JAW5 83 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 SDCBPO00560 298 aaPredicted RBP1.39□□□□□ -2.19
UBR1-205ENST00000564540 HIST1H2BKO60814 126 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 TIMM17BO60830 172 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 HIST1H2BJP06899 126 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 P0DMU3 169 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 FAM231AP0DMU4 169 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 FAM231CP0DMU5 169 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 SDC2P34741 201 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 TMEM155Q4W5P6 130 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 ZNF826PQ6ZT77 177 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 LINC00305Q7Z4B0 112 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 SPACA4Q8TDM5 124 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 CBLN4Q9NTU7 201 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 HSPB8Q9UJY1 196 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 HIGD1AQ9Y241 93 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 PTPRBP23467 1997 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 SCN8AQ9UQD0 1980 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 ADGRB3O60242 1522 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 KDM5BQ9UGL1 1544 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 NUP210Q8TEM1 1887 aaPredicted RBP1.39□□□□□ -2.19
UBR1-205ENST00000564540 TRAPPC8Q9Y2L5 1435 aa1.39□□□□□ -2.19
UBR1-205ENST00000564540 N4BP2Q86UW6 1770 aaPredicted RBP1.39□□□□□ -2.19
UBR1-205ENST00000564540 TRAV1-1A0A0B4J248 108 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 TRBV7-6A0A0J9YX20 115 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 A8MWV9 139 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 B4DSR2 109 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 RER1O15258 196 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 NDUFA2O43678 99 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 ZNF737O75373 536 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 SCTP09683 121 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 ZNF705BP0CI00 300 aaPredicted RBP1.38□□□□□ -2.19
UBR1-205ENST00000564540 MGST1P10620 155 aaKnown RBP1.38□□□□□ -2.19
UBR1-205ENST00000564540 CMPK1P30085 196 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 RPL35P42766 123 aaKnown RBP1.38□□□□□ -2.19
UBR1-205ENST00000564540 SRP9P49458 86 aaKnown RBP1.38□□□□□ -2.19
UBR1-205ENST00000564540 MYL5Q02045 173 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 ZNF846Q147U1 533 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 ESRGQ1W209 222 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 KRTAP21-3Q3LHN1 58 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 VMA21Q3ZAQ7 101 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 CCDC58Q4VC31 144 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 OR8I2Q8N0Y5 310 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 TEX29Q8N6K0 151 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 OR8J3Q8NGG0 315 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 OR4K15Q8NH41 348 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 ZNF714Q96N38 554 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 LXNQ9BS40 222 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 CXCL16Q9H2A7 254 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 TCEAL2Q9H3H9 227 aaPredicted RBP1.38□□□□□ -2.19
UBR1-205ENST00000564540 NIT2Q9NQR4 276 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 NHP2Q9NX24 153 aaKnown RBP1.38□□□□□ -2.19
UBR1-205ENST00000564540 TAS2R4Q9NYW5 299 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 CCDC88CQ9P219 2028 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 OVOS2A0A0G2JMS6 1433 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 ADAMTS7Q9UKP4 1686 aa1.38□□□□□ -2.19
UBR1-205ENST00000564540 KIAA2026Q5HYC2 2103 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 SMARCA4P51532 1647 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 H3BMG7 143 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 LY6LH3BQJ8 138 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 C1QCP02747 245 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 MT-ND4LP03901 98 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 DBIP07108 87 aaKnown RBP1.37□□□□□ -2.19
UBR1-205ENST00000564540 NDUFA6P56556 154 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 MORN2Q502X0 79 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 C7orf65Q6ZTY9 151 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 LRRC18Q8N456 261 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 OR5D16Q8NGK9 328 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 CHCHD1Q96BP2 118 aaKnown RBP1.37□□□□□ -2.19
UBR1-205ENST00000564540 SLC50A1Q9BRV3 221 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 NUP98P52948 1817 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 COL4A2P08572 1712 aa1.37□□□□□ -2.19
UBR1-205ENST00000564540 TRAV13-1A0A0B4J241 112 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 TRGV4A0A0C4DH28 118 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 TRBV27A0A0K0K1C4 114 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 RTEL1-TNFRSF6BF6WH68 1400 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 OR1I1O60431 355 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 DPM2O94777 84 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 SOGA1O94964 1423 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 OR2H2O95918 312 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 IGLV1-51P01701 117 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 IFNA4P05014 189 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 ASAH2BP0C7U1 165 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 BAALC-AS2P0C853 105 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 UBBP0CG47 229 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 MPC1LP0DKB6 136 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 MIFP14174 115 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 ROMO1P60602 79 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 HIST1H1AQ02539 215 aaPredicted RBP1.36□□□□□ -2.19
UBR1-205ENST00000564540 KLRD1Q13241 179 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 RNASE10Q5GAN6 216 aaKnown RBP1.36□□□□□ -2.19
UBR1-205ENST00000564540 TMEM244Q5VVB8 128 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms