RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 RBPMS2Q6ZRY4 209 aaKnown RBP10.3□□□□□ -0.76
CCDC187-201ENST00000563590 C11orf53Q8IXP5 236 aa10.3□□□□□ -0.76
CCDC187-201ENST00000563590 VSTM2AQ8TAG5 236 aa10.3□□□□□ -0.76
CCDC187-201ENST00000563590 EPDR1Q9UM22 224 aa10.3□□□□□ -0.76
CCDC187-201ENST00000563590 ZNF257Q9Y2Q1 563 aa10.3□□□□□ -0.76
CCDC187-201ENST00000563590 AKAP13Q12802 2813 aa10.3□□□□□ -0.76
CCDC187-201ENST00000563590 A0A1B0GV72 72 aa10.3□□□□□ -0.76
CCDC187-201ENST00000563590 ZNF329Q86UD4 541 aa10.3□□□□□ -0.76
CCDC187-201ENST00000563590 USP9XQ93008 2570 aaPredicted RBP10.3□□□□□ -0.76
CCDC187-201ENST00000563590 C9orf118A6NHY6 69 aa10.3□□□□□ -0.76
CCDC187-201ENST00000563590 TNFAIP6P98066 277 aaPredicted RBP10.3□□□□□ -0.76
CCDC187-201ENST00000563590 PSG3Q16557 428 aa10.3□□□□□ -0.76
CCDC187-201ENST00000563590 CHCHD1Q96BP2 118 aaKnown RBP10.3□□□□□ -0.76
CCDC187-201ENST00000563590 IGF2BP2-AS1Q96M15 143 aa10.3□□□□□ -0.76
CCDC187-201ENST00000563590 NCOR1P1Q9H4R4 102 aa10.3□□□□□ -0.76
CCDC187-201ENST00000563590 VWC2LB2RUY7 222 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 C15orf65H3BRN8 121 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 RBP4P02753 201 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 IFI27P40305 119 aaPredicted RBP10.29□□□□□ -0.76
CCDC187-201ENST00000563590 SCGB2A2Q13296 93 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 SLC25A2Q9BXI2 301 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 JPT1Q9UK76 154 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 SMIM13P0DJ93 91 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 COX8AP10176 69 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 CT45A1Q5HYN5 189 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 INO80CQ6PI98 192 aaPredicted RBP10.29□□□□□ -0.76
CCDC187-201ENST00000563590 PIP4P1Q86T03 277 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 PCP2Q8IVA1 136 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 EXOC3-AS1Q8N2X6 119 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 CT45A3Q8NHU0 189 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 RELNP78509 3460 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 J3QW42 95 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 MGST3O14880 152 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 SAA1P0DJI8 122 aaPredicted RBP10.29□□□□□ -0.76
CCDC187-201ENST00000563590 OR10X1Q8NGY0 326 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 ZNF414Q96IQ9 312 aa10.29□□□□□ -0.76
CCDC187-201ENST00000563590 IGHV3-35A0A0C4DH35 117 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 IQCF6A8MYZ5 107 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 K7EP34 96 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 ARMS2P0C7Q2 107 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 CT45A6P0DMU7 189 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 CT45A5P0DMU8 189 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 CT45A7P0DMV0 189 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 KIR2DS2P43631 304 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 LINC00322Q6ZN03 302 aaPredicted RBP10.28□□□□□ -0.76
CCDC187-201ENST00000563590 URB1-AS1Q96HZ7 61 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 MS4A6AQ9H2W1 248 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 IGHV3OR16-8A0A075B7F1 116 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 TRGV8A0A0C4DH27 118 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 G3V4G9 280 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 SMKR1H3BMG3 65 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 CT45A10P0DMU9 189 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 CCL3L1P16619 93 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 CFHR2P36980 270 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 CD69Q07108 199 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 ADAMTSL5Q6ZMM2 481 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 C1orf229Q6ZS94 237 aaPredicted RBP10.28□□□□□ -0.76
CCDC187-201ENST00000563590 ZNF292O60281 2723 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 DSCAML1Q8TD84 2053 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 FAM90A9PA6NNJ1 464 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 SUB1P53999 127 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCDC187-201ENST00000563590 RIGQ13278 110 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 BCL6BQ8N143 479 aaPredicted RBP10.28□□□□□ -0.76
CCDC187-201ENST00000563590 GTSF1Q8WW33 167 aa10.28□□□□□ -0.76
CCDC187-201ENST00000563590 FAM90A27PA6NNH2 459 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 RBPJQ06330 500 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 ETDBQ3ZM63 59 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 AMTNQ6UX39 209 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 FAM222BQ8WU58 562 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 C1RLQ9NZP8 487 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 A0A1B0GUT8 65 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 K7EM74 188 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 SLC25A17O43808 307 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 LY6HO94772 140 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 FAM106CPP0CH98 169 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 KLF5Q13887 457 aaPredicted RBP10.27□□□□□ -0.77
CCDC187-201ENST00000563590 HES1Q14469 280 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 FAM106AQ4KMX7 169 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 OR1L8Q8NGR8 309 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 PCSK5Q92824 1860 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 DLL1O00548 723 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 FAM169BQ8N8A8 192 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 MRPL32Q9BYC8 188 aaKnown RBP10.27□□□□□ -0.77
CCDC187-201ENST00000563590 Q9H3A6 140 aa10.27□□□□□ -0.77
CCDC187-201ENST00000563590 PTPRBP23467 1997 aa10.26□□□□□ -0.77
CCDC187-201ENST00000563590 SRRM4A7MD48 611 aaKnown RBP10.26□□□□□ -0.77
CCDC187-201ENST00000563590 K7EQM0 130 aa10.26□□□□□ -0.77
CCDC187-201ENST00000563590 HSD52Q0P140 79 aa10.26□□□□□ -0.77
CCDC187-201ENST00000563590 SH2D6Q7Z4S9 175 aa10.26□□□□□ -0.77
CCDC187-201ENST00000563590 SPRY4Q9C004 299 aa10.26□□□□□ -0.77
CCDC187-201ENST00000563590 CKS1BP61024 79 aa10.26□□□□□ -0.77
CCDC187-201ENST00000563590 RASL11AQ6T310 242 aa10.26□□□□□ -0.77
CCDC187-201ENST00000563590 TNFRSF14Q92956 283 aa10.26□□□□□ -0.77
CCDC187-201ENST00000563590 D6R8Y8 96 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 UPK2O00526 184 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 OR2J3O76001 311 aa10.25□□□□□ -0.77
CCDC187-201ENST00000563590 PPIFP30405 207 aaKnown RBP10.25□□□□□ -0.77
CCDC187-201ENST00000563590 FCGR2BP31994 310 aaPredicted RBP10.25□□□□□ -0.77
CCDC187-201ENST00000563590 KIR2DL2P43627 348 aaPredicted RBP10.25□□□□□ -0.77
CCDC187-201ENST00000563590 PRCDQ00LT1 54 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms