RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 GRINAQ7Z429 371 aa0.29□□□□□ -2.36
DENND4A-205ENST00000562540 LYSMD1Q96S90 227 aa0.29□□□□□ -2.36
DENND4A-205ENST00000562540 FAM32AQ9Y421 112 aaKnown RBP0.29□□□□□ -2.36
DENND4A-205ENST00000562540 NINQ8N4C6 2090 aa0.29□□□□□ -2.36
DENND4A-205ENST00000562540 CCDC144AA2RUR9 1427 aa0.29□□□□□ -2.36
DENND4A-205ENST00000562540 TMEM114B3SHH9 223 aa0.28□□□□□ -2.36
DENND4A-205ENST00000562540 C17orf112F2Z3M2 114 aa0.28□□□□□ -2.36
DENND4A-205ENST00000562540 IFNA7P01567 189 aa0.28□□□□□ -2.36
DENND4A-205ENST00000562540 HOXA6P31267 233 aa0.28□□□□□ -2.36
DENND4A-205ENST00000562540 ATP5G3P48201 142 aa0.28□□□□□ -2.36
DENND4A-205ENST00000562540 UBE2BP63146 152 aa0.28□□□□□ -2.36
DENND4A-205ENST00000562540 LIN52Q52LA3 116 aa0.28□□□□□ -2.36
DENND4A-205ENST00000562540 PRAP1Q96NZ9 151 aa0.28□□□□□ -2.36
DENND4A-205ENST00000562540 PRRT1Q99946 306 aa0.28□□□□□ -2.36
DENND4A-205ENST00000562540 NPCDR1Q9BY65 106 aa0.28□□□□□ -2.36
DENND4A-205ENST00000562540 PBOV1Q9GZY1 135 aa0.28□□□□□ -2.36
DENND4A-205ENST00000562540 M0R233 179 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 PRH1P02810 166 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 OR10J4P0C629 311 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 CXCL8P10145 99 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 HLA-EP13747 358 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 COX7CP15954 63 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 C1orf134Q5TEV5 83 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 OR10AC1Q8NH08 325 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 RAB37Q96AX2 223 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 TEX37Q96LM6 180 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 SMR3AQ99954 134 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 WFDC10AQ9H1F0 79 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 ENY2Q9NPA8 101 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 FRAS1Q86XX4 4008 aa0.27□□□□□ -2.37
DENND4A-205ENST00000562540 A0A0D9SG42 100 aa0.26□□□□□ -2.37
DENND4A-205ENST00000562540 B4DSR2 109 aa0.26□□□□□ -2.37
DENND4A-205ENST00000562540 HMGB3O15347 200 aaKnown RBP0.26□□□□□ -2.37
DENND4A-205ENST00000562540 GGCTO75223 188 aaKnown RBP0.26□□□□□ -2.37
DENND4A-205ENST00000562540 SPATA45Q537H7 98 aa0.26□□□□□ -2.37
DENND4A-205ENST00000562540 AKIRIN2Q53H80 203 aa0.26□□□□□ -2.37
DENND4A-205ENST00000562540 GOLT1AQ6ZVE7 132 aa0.26□□□□□ -2.37
DENND4A-205ENST00000562540 OR10X1Q8NGY0 326 aa0.26□□□□□ -2.37
DENND4A-205ENST00000562540 Q8TAT8 98 aa0.26□□□□□ -2.37
DENND4A-205ENST00000562540 MUCL1Q96DR8 90 aa0.26□□□□□ -2.37
DENND4A-205ENST00000562540 PTPRZ1P23471 2315 aaPredicted RBP0.26□□□□□ -2.37
DENND4A-205ENST00000562540 ARHGEF11O15085 1522 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 TRAV23DV6A0A075B6W5 121 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 A0A087WSZ3 146 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 FAM159BA6NKW6 160 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 RAB5CP51148 216 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 DYNLT3P51808 116 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 EXOC3-AS1Q8N2X6 119 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 OR10AG1Q8NH19 301 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 OR4K15Q8NH41 348 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 C9orf16Q9BUW7 83 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 GGACTQ9BVM4 153 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 CCDC94Q9BW85 323 aaPredicted RBP0.25□□□□□ -2.37
DENND4A-205ENST00000562540 OPTCQ9UBM4 332 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 OR52A1Q9UKL2 312 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 ARL2BPQ9Y2Y0 163 aa0.25□□□□□ -2.37
DENND4A-205ENST00000562540 CECR2Q9BXF3 1484 aa0.24□□□□□ -2.37
DENND4A-205ENST00000562540 JMJD7-PLA2G4BH0Y9G9 81 aa0.24□□□□□ -2.37
DENND4A-205ENST00000562540 TMEM256-PLSCR3K7ERE1 68 aa0.24□□□□□ -2.37
DENND4A-205ENST00000562540 NFYBP25208 207 aa0.24□□□□□ -2.37
DENND4A-205ENST00000562540 SPINK7P58062 85 aa0.24□□□□□ -2.37
DENND4A-205ENST00000562540 TAF1AQ15573 450 aaPredicted RBP0.24□□□□□ -2.37
DENND4A-205ENST00000562540 OR5D16Q8NGK9 328 aa0.24□□□□□ -2.37
DENND4A-205ENST00000562540 CHCHD1Q96BP2 118 aaKnown RBP0.24□□□□□ -2.37
DENND4A-205ENST00000562540 ZC2HC1AQ96GY0 325 aa0.24□□□□□ -2.37
DENND4A-205ENST00000562540 ZNF714Q96N38 554 aa0.24□□□□□ -2.37
DENND4A-205ENST00000562540 BDP1A6H8Y1 2624 aa0.24□□□□□ -2.37
DENND4A-205ENST00000562540 MAST4O15021 2626 aa0.24□□□□□ -2.37
DENND4A-205ENST00000562540 NUP98P52948 1817 aa0.24□□□□□ -2.37
DENND4A-205ENST00000562540 ANKRD17O75179 2603 aaKnown RBP0.23□□□□□ -2.37
DENND4A-205ENST00000562540 MYLKQ15746 1914 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 MGAMO43451 1857 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 TRAV27A0A087WT01 109 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 K7EIL1 84 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 PPYP01298 95 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 CST2P09228 141 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 KDELR1P24390 212 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 HSPE1P61604 102 aaKnown RBP0.23□□□□□ -2.37
DENND4A-205ENST00000562540 CIRBPQ14011 172 aaKnown RBP0.23□□□□□ -2.37
DENND4A-205ENST00000562540 GLIPR1L1Q6UWM5 242 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 S100A7AQ86SG5 101 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 ATOH7Q8N100 152 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 POP5Q969H6 163 aaKnown RBP0.23□□□□□ -2.37
DENND4A-205ENST00000562540 TCEAL2Q9H3H9 227 aaPredicted RBP0.23□□□□□ -2.37
DENND4A-205ENST00000562540 POPDC3Q9HBV1 291 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 PLAC8Q9NZF1 115 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 RNF11Q9Y3C5 154 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 ARL5AQ9Y689 179 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 IGF2RP11717 2491 aa0.23□□□□□ -2.37
DENND4A-205ENST00000562540 DUXBA0A1W2PPF3 345 aa0.22□□□□□ -2.37
DENND4A-205ENST00000562540 BANF1O75531 89 aa0.22□□□□□ -2.37
DENND4A-205ENST00000562540 NDUFC2O95298 119 aa0.22□□□□□ -2.37
DENND4A-205ENST00000562540 SERPINA1P01009 418 aa0.22□□□□□ -2.37
DENND4A-205ENST00000562540 ERVS71-1P61550 626 aa0.22□□□□□ -2.37
DENND4A-205ENST00000562540 NCALDP61601 193 aa0.22□□□□□ -2.37
DENND4A-205ENST00000562540 REEP5Q00765 189 aa0.22□□□□□ -2.37
DENND4A-205ENST00000562540 IFT20Q8IY31 132 aa0.22□□□□□ -2.37
DENND4A-205ENST00000562540 OR5AS1Q8N127 324 aa0.22□□□□□ -2.37
DENND4A-205ENST00000562540 HYLS1Q96M11 299 aa0.22□□□□□ -2.37
DENND4A-205ENST00000562540 PHB2Q99623 299 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms