RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 CHCHD5Q9BSY4 110 aa1.9□□□□□ -2.1
RNF111-211ENST00000560952 SHANK2-AS3Q9BTD1 123 aa1.9□□□□□ -2.1
RNF111-211ENST00000560952 RNF126Q9BV68 326 aa1.9□□□□□ -2.1
RNF111-211ENST00000560952 AIG1Q9NVV5 245 aa1.9□□□□□ -2.1
RNF111-211ENST00000560952 SPRR3Q9UBC9 169 aa1.9□□□□□ -2.1
RNF111-211ENST00000560952 CTSZQ9UBR2 303 aa1.9□□□□□ -2.1
RNF111-211ENST00000560952 TP73-AS1Q9UF72 201 aa1.9□□□□□ -2.1
RNF111-211ENST00000560952 HLA-DRB4X5D2U9 266 aa1.9□□□□□ -2.1
RNF111-211ENST00000560952 TRPM1Q7Z4N2 1603 aa1.9□□□□□ -2.1
RNF111-211ENST00000560952 GREB1LQ9C091 1923 aaPredicted RBP1.9□□□□□ -2.11
RNF111-211ENST00000560952 MYO9BQ13459 2157 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 KNDC1Q76NI1 1749 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 C2CD3Q4AC94 2353 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 NUP210LQ5VU65 1888 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 SCN5AQ14524 2016 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 KIDINS220Q9ULH0 1771 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 SYCP2Q9BX26 1530 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 GPATCH8Q9UKJ3 1502 aaKnown RBP1.9□□□□□ -2.11
RNF111-211ENST00000560952 TRAV9-1A0A075B6T8 112 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 TRAV1-1A0A0B4J248 108 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 A0A0J9YXV3 536 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 FAM24AA6NFZ4 105 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 C9JQL5 133 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 E9PLD3 99 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 ZNF73O43830 326 aaPredicted RBP1.9□□□□□ -2.11
RNF111-211ENST00000560952 TRBV12-3P01733 135 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 ZNF883P0CG24 379 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 LGALS3P17931 250 aaKnown RBP1.9□□□□□ -2.11
RNF111-211ENST00000560952 CBLN1P23435 193 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 INPP1P49441 399 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 ZNF80P51504 273 aaPredicted RBP1.9□□□□□ -2.11
RNF111-211ENST00000560952 NCBP2P52298 156 aaKnown RBP eCLIP1.9□□□□□ -2.11
RNF111-211ENST00000560952 SNRPD3P62318 126 aaKnown RBP1.9□□□□□ -2.11
RNF111-211ENST00000560952 PYDC2Q56P42 97 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 LGALS9CQ6DKI2 356 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 TMEM91Q6ZNR0 172 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 SH2D6Q7Z4S9 175 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 BPIFA4PQ86YQ2 179 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 ZNF555Q8NEP9 628 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 OR8A1Q8NGG7 326 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 MS4A6EQ96DS6 147 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 C17orf77Q96MU5 243 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 TIMM17AQ99595 171 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 CCL13Q99616 98 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 PMCHL2Q9BQD1 86 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 SRXN1Q9BYN0 137 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 FAM60AQ9NP50 221 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 SELENOKQ9Y6D0 94 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 SPTA1P02549 2419 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 DENND4CQ5VZ89 1909 aa1.9□□□□□ -2.11
RNF111-211ENST00000560952 MICAL3Q7RTP6 2002 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 NUP205Q92621 2012 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 CCDC88CQ9P219 2028 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 ARHGAP5Q13017 1502 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 TRBV24-1A0A075B6N3 115 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 IGHV1-69DA0A0B4J2H0 117 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 TRBV5-4A0A0C4DH59 114 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 KANTRA0A1W2PQU2 76 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 IRGMA1A4Y4 181 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 A8MWL6 223 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 K7N7A8 449 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 CREBL2O60519 120 aaPredicted RBP1.89□□□□□ -2.11
RNF111-211ENST00000560952 FSTL3O95633 263 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 COX6A1P12074 109 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 COX7CP15954 63 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 FAUP35544 74 aaKnown RBP1.89□□□□□ -2.11
RNF111-211ENST00000560952 CXCL5P42830 114 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 DAPP51397 102 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 ERVK-16P61578 105 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 RPS21P63220 83 aaKnown RBP1.89□□□□□ -2.11
RNF111-211ENST00000560952 REG3AQ06141 175 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 PMCHL1Q16048 86 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 EBLN2Q6P2I7 272 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 LINC00173Q6ZV60 143 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 DEFB107AQ8IZN7 70 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 FGFBP2Q9BYJ0 223 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 SIX2Q9NPC8 291 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 TNFRSF19Q9NS68 423 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 SLC39A9Q9NUM3 307 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 ZNF581Q9P0T4 197 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 XCL2Q9UBD3 114 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 HHLA3Q9XRX5 114 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 LSM2Q9Y333 95 aaKnown RBP1.89□□□□□ -2.11
RNF111-211ENST00000560952 DNAJC15Q9Y5T4 150 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 SERP1Q9Y6X1 66 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 ANKARQ7Z5J8 1434 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 UBR1Q8IWV7 1749 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 LAMC1P11047 1609 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 RLFQ13129 1914 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 LOXHD1Q8IVV2 1947 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 QRICH2Q9H0J4 1663 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 KCPQ6ZWJ8 1503 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 DNAH14Q0VDD8 3507 aa1.89□□□□□ -2.11
RNF111-211ENST00000560952 TRPM3Q9HCF6 1732 aaPredicted RBP1.88□□□□□ -2.11
RNF111-211ENST00000560952 DMXL1Q9Y485 3027 aa1.88□□□□□ -2.11
RNF111-211ENST00000560952 IGHV6-1A0A0B4J1U7 121 aa1.88□□□□□ -2.11
RNF111-211ENST00000560952 IGLV9-49A0A0B4J1Y8 123 aa1.88□□□□□ -2.11
RNF111-211ENST00000560952 IGKV1-8A0A0C4DH67 115 aa1.88□□□□□ -2.11
RNF111-211ENST00000560952 A0A0D9SEW6 157 aa1.88□□□□□ -2.11
RNF111-211ENST00000560952 UMAD1C9J7I0 102 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms