RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 VSTM2AQ8TAG5 236 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 TSKUQ8WUA8 353 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 ORAOV1Q8WV07 137 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 LEAP2Q969E1 77 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 ST6GALNAC6Q969X2 333 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 FXYD5Q96DB9 178 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 SNRNP40Q96DI7 357 aaKnown RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 FAM122AQ96E09 287 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 GRAMD2BQ96HH9 432 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 HARBI1Q96MB7 349 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 RBM14Q96PK6 669 aaKnown RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 TRGV9Q99603 122 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 ALKBH7Q9BT30 221 aaPredicted RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 PAXXQ9BUH6 204 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 ARRDC1-AS1Q9H2J1 176 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 GAL3ST2Q9H3Q3 398 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 FNDC4Q9H6D8 234 aaPredicted RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 ST20Q9HBF5 79 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 DNAJC4Q9NNZ3 241 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 ASCL3Q9NQ33 180 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 TNFRSF19Q9NS68 423 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 ZNF355PQ9NSJ1 428 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 DCAF16Q9NXF7 216 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 FZR1Q9UM11 496 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 LAMTOR2Q9Y2Q5 125 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 AMMECR1Q9Y4X0 333 aaPredicted RBP1.94□□□□□ -2.1
SPG11-223ENST00000560858 KLF12Q9Y4X4 402 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 FAM215AQ9Y5M1 114 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 PLXNB1O43157 2135 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 EYSQ5T1H1 3165 aa1.94□□□□□ -2.1
SPG11-223ENST00000560858 ZNF318Q5VUA4 2279 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 ZGRF1Q86YA3 2104 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 SVILO95425 2214 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 TRAV9-2A0A087WT02 112 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 A0A1W2PPI3 338 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 hADV38S2A0JD32 116 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 IGLC7A0M8Q6 106 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 DPRXA6NFQ7 191 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 HIGD1CA8MV81 97 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 PRAC2D3DTV9 90 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 E7EUB6 86 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 K7EP13 123 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 M0R1B8 84 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 CORTO00230 105 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 COX7A2P2O60397 106 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 HSBP1O75506 76 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 CA1P00915 261 aaPredicted RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 LTAP01374 205 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 IGHV3-7P01780 117 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 PYYP10082 97 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 HIST1H1EP10412 219 aaKnown RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 MGST1P10620 155 aaKnown RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 NTF3P20783 257 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 TNFSF4P23510 183 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 GATA2P23769 480 aaPredicted RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 CEACAM8P31997 349 aaPredicted RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 MFAP2P55001 183 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 UBE2G1P62253 170 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 SLC35B1P78383 322 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 ERHP84090 104 aaKnown RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 RHOGP84095 191 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 TNFAIP6P98066 277 aaPredicted RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 SRSF6Q13247 344 aaKnown RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 MMDQ15546 238 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 TNXAQ16473 311 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 KIAA1644Q3SXP7 199 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 TMEM155Q4W5P6 130 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 C10orf55Q5SWW7 151 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 FAM201AQ5SY85 155 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 C1orf185Q5T7R7 199 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 C10orf113Q5VZT2 155 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 EBLN2Q6P2I7 272 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 IGFL3Q6UXB1 125 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 PATE2Q6UY27 113 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 Q6ZN92 141 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 SPATA12Q7Z6I5 190 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 ZCCHC24Q8N2G6 241 aaKnown RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 MUC15Q8N387 334 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 C11orf42Q8N5U0 333 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 TMEM116Q8NCL8 245 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 STXBP6Q8NFX7 210 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 OR10W1Q8NGF6 305 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 OR4C13Q8NGP0 309 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 NPIPB3Q92617 1050 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 TMEM186Q96B77 213 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 CHCHD1Q96BP2 118 aaKnown RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 PERPQ96FX8 193 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 FMC1Q96HJ9 113 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 GPR82Q96P67 336 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 TXN2Q99757 166 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 HINT2Q9BX68 163 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 CLEC7AQ9BXN2 247 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 RPP21Q9H633 154 aaKnown RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 ZNF331Q9NQX6 463 aaPredicted RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 MRPL36Q9P0J6 103 aaKnown RBP1.93□□□□□ -2.1
SPG11-223ENST00000560858 TMEM14CQ9P0S9 112 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 ZNRD1Q9P1U0 126 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 KAAG1Q9UBP8 84 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 CTSZQ9UBR2 303 aa1.93□□□□□ -2.1
SPG11-223ENST00000560858 EPDR1Q9UM22 224 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms