RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 YPEL3P61236 119 aaPredicted RBP7.57□□□□□ -1.2
TRPM1-212ENST00000560801 DEFB135Q30KP9 77 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 CD300EQ496F6 205 aaPredicted RBP7.57□□□□□ -1.2
TRPM1-212ENST00000560801 ZNF880Q6PDB4 577 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 OR11H4Q8NGC9 324 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 ZNF747Q9BV97 191 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 DPH3P1Q9H4G8 78 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 A0A087X0M5 115 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 A0A1B0GX30 115 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 USF2Q15853 346 aaPredicted RBP7.57□□□□□ -1.2
TRPM1-212ENST00000560801 OR10J3Q5JRS4 329 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 RNASEKQ6P5S7 137 aaKnown RBP7.57□□□□□ -1.2
TRPM1-212ENST00000560801 ZNF491Q8N8L2 437 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 Q9H3A6 140 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 PDE6DO43924 150 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 C19orf54Q5BKX5 351 aa7.57□□□□□ -1.2
TRPM1-212ENST00000560801 TRAV9-2A0A087WT02 112 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 BSXQ3C1V8 233 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 C19orf35Q6ZS72 473 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 COMMD7Q86VX2 200 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 DYNAPQ8N1N2 210 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 CYB561D1Q8N8Q1 229 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 TMEM18Q96B42 140 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 FBLL1A6NHQ2 334 aaKnown RBP7.56□□□□□ -1.2
TRPM1-212ENST00000560801 C15orf62A8K5M9 175 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 SPINK13Q1W4C9 94 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 TRAV25A0A0B4J276 109 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 C2orf70A6NJV1 201 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 LURAP1LQ8IV03 231 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 NXF2Q9GZY0 626 aaKnown RBP7.56□□□□□ -1.2
TRPM1-212ENST00000560801 TEX48A0A1B0GUV7 120 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 EIF3GO75821 320 aaKnown RBP eCLIP7.56□□□□□ -1.2
TRPM1-212ENST00000560801 TCL1AP56279 114 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 WT1-ASQ06250 92 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 MLANAQ16655 118 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 TMEM241Q24JQ0 296 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 OR11H2Q8NH07 326 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 SIGLEC8Q9NYZ4 499 aa7.56□□□□□ -1.2
TRPM1-212ENST00000560801 H0Y8G0 127 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 SPART-AS1P0CW21 52 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 GCHFRP30047 84 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 MIR17HGQ75NE6 70 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 FA2HQ7L5A8 372 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 APRG1Q8IVJ8 170 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 LINC00477Q96M19 166 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 ZNF702PQ9H963 129 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 TMEM14BQ9NUH8 114 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 TRANK1O15050 2925 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 RPL29P47914 159 aaKnown RBP7.55□□□□□ -1.2
TRPM1-212ENST00000560801 PSG3Q16557 428 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 NMSQ5H8A3 153 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 MORN3Q6PF18 240 aaPredicted RBP7.55□□□□□ -1.2
TRPM1-212ENST00000560801 Q6ZN92 141 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 BAGE3Q86Y29 109 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 VAX2Q9UIW0 290 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 A8MWL6 223 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 PPP1R2P9O14990 202 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 SEC11BP0C7V7 166 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 SPNP16150 400 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 CRYBB3P26998 211 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 TCF23Q7RTU1 214 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 HIST1H2BAQ96A08 127 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 CHCHD5Q9BSY4 110 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 OTORQ9NRC9 128 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 POLR3KQ9Y2Y1 108 aaPredicted RBP7.55□□□□□ -1.2
TRPM1-212ENST00000560801 RFNGQ9Y644 331 aa7.55□□□□□ -1.2
TRPM1-212ENST00000560801 TRAV8-6A0A0B4J262 113 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 B4DEV8 164 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 HSBP1L1C9JCN9 74 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 C1orf194Q5T5A4 169 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 TMEM190Q8WZ59 177 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 TMEM101Q96IK0 257 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 NCKAP5O14513 1909 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 SNAPINO95295 136 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 CCL18P55774 89 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 CFHR3Q02985 330 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 SPATA31B1PQ5VZV4 182 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 IGFL4Q6B9Z1 124 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 TXNDC17Q9BRA2 123 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 FABP5P3A8MUU1 101 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 HIST2H2BDQ6DRA6 164 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 LHFPL1Q86WI0 220 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 PYYP10082 97 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 ID3Q02535 119 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 Q6ZSR3 168 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 ZNF439Q8NDP4 499 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 PRSS3P2Q8NHM4 247 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 ZNF48Q96MX3 618 aaPredicted RBP7.54□□□□□ -1.2
TRPM1-212ENST00000560801 AGMATQ9BSE5 352 aa7.54□□□□□ -1.2
TRPM1-212ENST00000560801 FABP9Q0Z7S8 132 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 RNF183Q96D59 192 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 A0A1W2PPQ1 181 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 GAGE12BA1L429 117 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 IGLL5B9A064 214 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 BOLA2-SMG1P6H3BVE0 249 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 GAGE7O76087 117 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 GAGE12FP0CL80 117 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 GAGE12GP0CL81 117 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 GAGE12IP0CL82 117 aa7.53□□□□□ -1.2
TRPM1-212ENST00000560801 PRB4P10163 310 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms