RNA–Protein interactions for RNA: ENST00000559557.1

MRPS11-208, Transcript of mitochondrial ribosomal protein S11, human

TSL 3

Gene MRPS11, Length 447 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS11-208	ENST00000559557	NXF2	Q9GZY0	626 aa	Known RBP	3.03	□□□□□ -1.92
MRPS11-208	ENST00000559557	C11orf68	Q9H3H3	251 aa	Known RBP	3.03	□□□□□ -1.92
MRPS11-208	ENST00000559557	FNDC4	Q9H6D8	234 aa	Predicted RBP	3.03	□□□□□ -1.92
MRPS11-208	ENST00000559557	VSIR	Q9H7M9	311 aa		3.03	□□□□□ -1.92
MRPS11-208	ENST00000559557	IFT46	Q9NQC8	304 aa		3.03	□□□□□ -1.92
MRPS11-208	ENST00000559557	SMPX	Q9UHP9	88 aa		3.03	□□□□□ -1.92
MRPS11-208	ENST00000559557	OR4C46	A6NHA9	309 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	RPL37AP8	A6NKH3	93 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557		K7EMT4	169 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	UBE2C	O00762	179 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	ST8SIA3	O43173	380 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	CA1	P00915	261 aa	Predicted RBP	3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	RBMY1A1	P0DJD3	496 aa	Known RBP	3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	RBMY1C	P0DJD4	496 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	PPP5C	P53041	499 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	TAS2R46	P59540	309 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	NCS1	P62166	190 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	RBMY1F	Q15415	496 aa	Known RBP	3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	VWC2	Q2TAL6	325 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	KCTD21	Q4G0X4	260 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	C2orf83	Q53S99	150 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	LGALS9C	Q6DKI2	356 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	PVRIG	Q6DKI7	326 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	TOMM20L	Q6UXN7	152 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	LHFPL1	Q86WI0	220 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	SNX29P2	Q8IUI4	249 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	SLC38A6	Q8IZM9	456 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	OR11H2	Q8NH07	326 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	SLC25A46	Q96AG3	418 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	PINX1	Q96BK5	328 aa	Known RBP	3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	TP53RK	Q96S44	253 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	ATP6V0B	Q99437	205 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	NAA50	Q9GZZ1	169 aa	Known RBP	3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	MS4A6A	Q9H2W1	248 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	DIABLO	Q9NR28	239 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	THYN1	Q9P016	225 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	PRND	Q9UKY0	176 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	PUS1	Q9Y606	427 aa	Known RBP eCLIP	3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	HERC1	Q15751	4861 aa		3.02	□□□□□ -1.93
MRPS11-208	ENST00000559557	KNCN	A6PVL3	124 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	HPGDS	O60760	199 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	SNAPC5	O75971	98 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	YIF1A	O95070	293 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	IGKV1-17	P01599	117 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	RNASE2	P10153	161 aa	Known RBP	3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	ELK1	P19419	428 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	PRSS3	P35030	304 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	DEFB131A	P59861	70 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	RND3	P61587	244 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	VBP1	P61758	197 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	BSX	Q3C1V8	233 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	LAMTOR1	Q6IAA8	161 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	ZNF767P	Q75MW2	155 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	TCF24	Q7RTU0	167 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	LHFPL5	Q8TAF8	219 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	DCANP1	Q8TF63	244 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	S100A16	Q96FQ6	103 aa	Known RBP	3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	TMEM56	Q96MV1	263 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	RARRES2	Q99969	163 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	COMMD3	Q9UBI1	195 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	APLN	Q9ULZ1	77 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	DNAH8	Q96JB1	4490 aa		3.01	□□□□□ -1.93
MRPS11-208	ENST00000559557	FAT1	Q14517	4588 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	TRAV14DV4	A0A0A6YYC5	116 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	ZNF705E	A8MWA4	302 aa	Predicted RBP	3	□□□□□ -1.93
MRPS11-208	ENST00000559557	INS-IGF2	F8WCM5	200 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557		K7EQG2	157 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	GNG7	O60262	68 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	TMEM50A	O95807	157 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	APOA1	P02647	267 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	CD3D	P04234	171 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	ZNF688	P0C7X2	276 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	CRYBB3	P26998	211 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	RCVRN	P35243	200 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	PIGP	P57054	158 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	DEFB1	P60022	68 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	HSPE1	P61604	102 aa	Known RBP	3	□□□□□ -1.93
MRPS11-208	ENST00000559557	SP6	Q3SY56	376 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	TIGIT	Q495A1	244 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	MUC21	Q5SSG8	566 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	GDF5OS	Q5U4N7	250 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	ZNF600	Q6ZNG1	722 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	H2BFWT	Q7Z2G1	175 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	CMTM1	Q8IZ96	169 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	STXBP6	Q8NFX7	210 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	OR13C8	Q8NGS7	320 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	OR6F1	Q8NGZ6	308 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	OR4A16	Q8NH70	328 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	BORCS5	Q969J3	196 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	TSC22D3	Q99576	134 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	TXN2	Q99757	166 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	FUNDC2	Q9BWH2	189 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557		Q9H521	79 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	RABAC1	Q9UI14	185 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	KLK5	Q9Y337	293 aa	Predicted RBP	3	□□□□□ -1.93
MRPS11-208	ENST00000559557	MYCBP2	O75592	4640 aa		3	□□□□□ -1.93
MRPS11-208	ENST00000559557	TRAV2	A0A0B4J234	112 aa		2.99	□□□□□ -1.93
MRPS11-208	ENST00000559557	IGLL5	B9A064	214 aa		2.99	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms