RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 USF2Q15853 346 aaPredicted RBP8.68□□□□□ -1.02
SPG11-217ENST00000559511 CRYBG3Q68DQ2 2970 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 Q71RC1 249 aaPredicted RBP8.68□□□□□ -1.02
SPG11-217ENST00000559511 CCL19Q99731 98 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 GNB4Q9HAV0 340 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 IGHV7-81A0A0B4J1V7 117 aa8.67□□□□□ -1.02
SPG11-217ENST00000559511 VWC2LB2RUY7 222 aa8.67□□□□□ -1.02
SPG11-217ENST00000559511 BMPR1BO00238 502 aa8.67□□□□□ -1.02
SPG11-217ENST00000559511 IGLV2-11P01706 119 aa8.67□□□□□ -1.02
SPG11-217ENST00000559511 IGHV3-23P01764 117 aa8.67□□□□□ -1.02
SPG11-217ENST00000559511 UBE2E1P51965 193 aa8.67□□□□□ -1.02
SPG11-217ENST00000559511 COX19Q49B96 90 aa8.67□□□□□ -1.02
SPG11-217ENST00000559511 Q8N9W7 124 aa8.67□□□□□ -1.02
SPG11-217ENST00000559511 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
SPG11-217ENST00000559511 NEU1Q99519 415 aa8.67□□□□□ -1.02
SPG11-217ENST00000559511 TBL2Q9Y4P3 447 aaKnown RBP8.67□□□□□ -1.02
SPG11-217ENST00000559511 MAP1AP78559 2803 aaPredicted RBP8.67□□□□□ -1.02
SPG11-217ENST00000559511 TRBV19A0A075B6N1 114 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 MRPS12O15235 138 aaKnown RBP8.66□□□□□ -1.02
SPG11-217ENST00000559511 NDUFB8O95169 186 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 HLA-DQA1P01909 254 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 PRB4P10163 310 aaPredicted RBP8.66□□□□□ -1.02
SPG11-217ENST00000559511 SAA4P35542 130 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 MFAP4P55083 255 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 SLAQ13239 276 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 GDF5OSQ5U4N7 250 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 Q86TA4 180 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 BAGE3Q86Y29 109 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 BPIFA4PQ86YQ2 179 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 ZNF664Q8N3J9 261 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 ZNF843Q8N446 348 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 ZNF48Q96MX3 618 aaPredicted RBP8.66□□□□□ -1.02
SPG11-217ENST00000559511 HSPB9Q9BQS6 159 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 TRAV30A0A087WSZ9 112 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 C19orf71A6NCJ1 209 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 OR2J3O76001 311 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 HLA-DRB1P01911 266 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 SRIP30626 198 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 FCGR2BP31994 310 aaPredicted RBP8.66□□□□□ -1.02
SPG11-217ENST00000559511 Q56UQ5 140 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 FAM209BQ5JX69 171 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 GOLT1AQ6ZVE7 132 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 WIPF2Q8TF74 440 aaPredicted RBP8.66□□□□□ -1.02
SPG11-217ENST00000559511 MS4A10Q96PG2 267 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 CHRDL1Q9BU40 450 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 PRSS22Q9GZN4 317 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 ZNF331Q9NQX6 463 aaPredicted RBP8.66□□□□□ -1.02
SPG11-217ENST00000559511 C21orf62Q9NYP8 219 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 ZNF462Q96JM2 2506 aa8.66□□□□□ -1.02
SPG11-217ENST00000559511 TMEM238LA0A1B0GVL6 79 aa8.65□□□□□ -1.02
SPG11-217ENST00000559511 TSTD3H0UI37 97 aa8.65□□□□□ -1.02
SPG11-217ENST00000559511 APCSP02743 223 aa8.65□□□□□ -1.02
SPG11-217ENST00000559511 FAM106CPP0CH98 169 aa8.65□□□□□ -1.02
SPG11-217ENST00000559511 CD33P20138 364 aa8.65□□□□□ -1.02
SPG11-217ENST00000559511 SIGLEC15Q6ZMC9 328 aa8.65□□□□□ -1.02
SPG11-217ENST00000559511 Q6ZWC4 215 aa8.65□□□□□ -1.02
SPG11-217ENST00000559511 CIARTQ8N365 385 aaPredicted RBP8.65□□□□□ -1.02
SPG11-217ENST00000559511 OR4F17Q8NGA8 305 aa8.65□□□□□ -1.02
SPG11-217ENST00000559511 RCHY1Q96PM5 261 aa8.65□□□□□ -1.02
SPG11-217ENST00000559511 RPP21Q9H633 154 aaKnown RBP8.65□□□□□ -1.02
SPG11-217ENST00000559511 LPAR2Q9HBW0 351 aa8.65□□□□□ -1.02
SPG11-217ENST00000559511 OR2T8A6NH00 312 aa8.65□□□□□ -1.03
SPG11-217ENST00000559511 TPPP2P59282 170 aa8.65□□□□□ -1.03
SPG11-217ENST00000559511 IQCJQ1A5X6 159 aa8.65□□□□□ -1.03
SPG11-217ENST00000559511 RASL11AQ6T310 242 aa8.65□□□□□ -1.03
SPG11-217ENST00000559511 TCF24Q7RTU0 167 aa8.65□□□□□ -1.03
SPG11-217ENST00000559511 PRNTQ86SH4 94 aa8.65□□□□□ -1.03
SPG11-217ENST00000559511 PIP4P2Q8N4L2 257 aa8.65□□□□□ -1.03
SPG11-217ENST00000559511 C10orf105Q8TEF2 133 aa8.65□□□□□ -1.03
SPG11-217ENST00000559511 GTSF1Q8WW33 167 aa8.65□□□□□ -1.03
SPG11-217ENST00000559511 ZNF492Q9P255 531 aa8.65□□□□□ -1.03
SPG11-217ENST00000559511 POLR3KQ9Y2Y1 108 aaPredicted RBP8.65□□□□□ -1.03
SPG11-217ENST00000559511 SCGB1D1O95968 90 aa8.64□□□□□ -1.03
SPG11-217ENST00000559511 PAX1P15863 534 aa8.64□□□□□ -1.03
SPG11-217ENST00000559511 DDTP30046 118 aa8.64□□□□□ -1.03
SPG11-217ENST00000559511 PAFAH1B2P68402 229 aa8.64□□□□□ -1.03
SPG11-217ENST00000559511 OR10J3Q5JRS4 329 aa8.64□□□□□ -1.03
SPG11-217ENST00000559511 ZNF414Q96IQ9 312 aa8.64□□□□□ -1.03
SPG11-217ENST00000559511 ASCL2Q99929 193 aa8.64□□□□□ -1.03
SPG11-217ENST00000559511 PIMREGQ9BSJ6 248 aa8.64□□□□□ -1.03
SPG11-217ENST00000559511 SPG11Q96JI7 2443 aa8.64□□□□□ -1.03
SPG11-217ENST00000559511 IGHV4-61A0A0C4DH41 118 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 A0A1B0GXF2 115 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 ZNF785A8K8V0 405 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 P01737 135 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 ATP5J2P56134 94 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 SRSF1Q07955 248 aaKnown RBP eCLIP8.63□□□□□ -1.032e-7■■■■□ 21.9
SPG11-217ENST00000559511 PRR31Q5SQ13 230 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 SSBP4Q9BWG4 385 aaPredicted RBP8.63□□□□□ -1.03
SPG11-217ENST00000559511 C1RLQ9NZP8 487 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 THYN1Q9P016 225 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 NAGKQ9UJ70 344 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 FBXL7Q9UJT9 491 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 RNF24Q9Y225 148 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 UBR5O95071 2799 aaPredicted RBP8.63□□□□□ -1.03
SPG11-217ENST00000559511 NPFFO15130 113 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 ZNF253O75346 499 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 CTSGP08311 255 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 CAMPP49913 170 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms